RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Grid2ipQ0QWG9 1203 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tmem26Q3UP23 366 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm3558Q5FWC9 205 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Znf410Q8BKX7 478 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Pak4Q8BTW9 593 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Osbpl2Q8BX94 484 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Elmo3Q8BYZ7 720 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gbp5Q8CFB4 590 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Slc47a1Q8K0H1 567 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Fam161aQ8QZV6 448 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Vmn1r64Q8R2B8 320 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ccdc59Q8R2N0 240 aaKnown RBP10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 FtcdQ91XD4 541 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tnpo2Q99LG2 887 aaKnown RBP10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Prelid3bQ9CYY7 195 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Creb3l4Q9D2A5 370 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ankef1Q9D2J7 775 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Mrpl17Q9D8P4 176 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Erap1Q9EQH2 930 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Caln1Q9JJG7 219 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Smok1Q9QYZ4 484 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ap4b1Q9WV76 738 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Padi4Q9Z183 666 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Fam205a1D3YZF6 1314 aa10.05□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Krt36B1AQ75 473 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 1700011I03RikE9PYL8 271 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Vmn2r104E9Q2J5 860 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm3127E9Q9P5 263 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 C130060K24RikG3UWA8 416 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Apol10bG3X9K7 334 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm3453K7N724 263 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gon7P0C8B4 98 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Zp3P10761 424 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 TtlP38585 377 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Akr1b1P45376 316 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Alox5P48999 674 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tnfaip8l3Q3TBL6 204 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nt5dc3Q3UHB1 546 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Grid2Q61625 1007 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Hsph1Q61699 858 aaKnown RBP10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Lemd2Q6DVA0 511 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 ScapQ6GQT6 1276 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Dzip1Q8BMD2 852 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Cops7bQ8BV13 264 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Znf451Q8C0P7 1056 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Rapgef5Q8C0Q9 814 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tmem259Q8CIV2 574 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Elf5Q8VDK3 253 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Pcdhgc3Q91XX1 934 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 CoprsQ9CQ13 173 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ndufaf1Q9CWX2 328 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Iqcf1Q9D9K8 182 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Stard3nlQ9DCI3 235 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Krt7Q9DCV7 457 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ifi30Q9ESY9 248 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 AllcQ9JHX6 414 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Hebp1Q9R257 190 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm3147A0A0J9YU88 481 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 CercamA3KGW5 592 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Zfp277E9Q6D6 583 aaKnown RBP10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 S100a9P31725 113 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Coq10bQ3THF9 240 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Zfp868Q3UTQ6 422 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Trim38Q5SZ99 471 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 HelbQ6NVF4 1074 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Klf11Q8K1S5 502 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Cnot6Q8K3P5 557 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Slc22a7Q91WU2 540 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Wrnip1Q91XU0 660 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nek6Q9ES70 313 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Myg1Q9JK81 380 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 TefQ9JLC6 301 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Magea2Q9R2A2 320 aa10.04□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Serpinb3cA2RSF9 386 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ttll10A4Q9F3 704 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm16430A6X8J1 155 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Wdr95D3Z7A8 784 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Taf4E9QAP7 1042 aaKnown RBP10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Svs3aF2Z472 265 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm3739L7N296 216 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Dpy19l2P0CW70 773 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 GzmdP11033 252 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 St14P56677 855 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Eif3eP60229 445 aaKnown RBP10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Dlg3P70175 849 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Pbxip1Q3TVI8 727 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Smu1Q3UKJ7 513 aaKnown RBP10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 OcrlQ6NVF0 900 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Kif11Q6P9P6 1052 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Rab39aQ8BHD0 217 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 ItchQ8C863 864 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Afg3l2Q8JZQ2 802 aaKnown RBP10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Akr1d1Q8VCX1 325 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 FdpsQ920E5 353 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 St5Q924W7 1134 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 PompQ9CQT5 141 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Slxl1Q9D515 155 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tgm5Q9D7I9 724 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Hmg20aQ9DC33 346 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tubb3Q9ERD7 450 aa10.03□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms