RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Ppm1nQ8BGL1 404 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pde2aQ922S4 916 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ror1Q9Z139 937 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Duox1A2AQ92 1551 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Scn7aB1AYL1 1681 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Olfr414E9Q5P8 317 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Sec22bO08547 215 aaKnown RBP10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Slurp2P0DP59 97 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 PolP11369 1281 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 PrkcdP28867 674 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Il1rapl1P59823 695 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Emilin3P59900 758 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Epas1P97481 874 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Shisa4Q8CA71 197 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Nup85Q8R480 656 aaKnown RBP10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Q8VDP2 222 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Hdhd5Q91WM2 419 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Zfp780bE9Q2S6 806 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gja5Q01231 358 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Arhgap45Q3TBD2 1116 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Zfp607aQ3TQG9 686 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gxylt1Q3UHH8 404 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Garnl3Q3V0G7 1038 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Fam160a1Q505K2 1081 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 StilQ60988 1262 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 E2f5Q61502 335 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Sel1l3Q80TS8 1137 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Cdkn2aipQ8BI72 563 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Btbd9Q8C726 612 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Vangl2Q91ZD4 521 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Cog2Q921L5 731 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 DmgdhQ9DBT9 869 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Igdcc4Q9EQS9 1252 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Slc25a13Q9QXX4 676 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ptpn4Q9WU22 926 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Sept5Q9Z2Q6 369 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Alpk3Q924C5 1678 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gm3173A6NAS3 172 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gm3020E9Q3J7 150 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Chrna9G3X8Z7 479 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 TpteG5E8H5 664 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gm2897K7N6T7 172 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 TnfP06804 235 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Msh2P43247 935 aaKnown RBP10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pnpla5Q32LZ8 432 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Mpzl3Q3V3F6 237 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gpd2Q64521 727 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Dnajc6Q80TZ3 938 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gm3411Q8C7R2 150 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Zfp263Q8CF60 680 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Chst7Q9EP78 484 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Slc15a2Q9ES07 729 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ruvbl2Q9WTM5 463 aaKnown RBP10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 RptorQ8K4Q0 1335 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Tnfrsf18O35714 228 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 CflarO35732 481 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pms2P54279 859 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 B3gat3P58158 335 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ptcd3Q14C51 685 aaKnown RBP10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ddr2Q62371 854 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Olfr1057Q7TR75 315 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Olfr389Q7TRX7 312 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Spdye4bQ8CDE8 236 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ccdc103Q9D9P2 237 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Rdh14Q9ERI6 334 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Sipa1l2Q80TE4 1722 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 1700031M16RikA0A087WSH0 82 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Akap17bA2A3V1 959 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Kpna7C0LLJ0 499 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 XntrpcF8VQM8 1264 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 PtgisO35074 501 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ap3d1O54774 1199 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 HunkO88866 714 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Cdh2P15116 906 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Fcer2P20693 331 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pax3P24610 479 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Trmt1Q3TX08 663 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Spout1Q3UHX9 385 aaKnown RBP10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Exoc3l4Q6DIA2 721 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Zfp418Q8BFS8 652 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Nlrp4bQ8C6J9 863 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ccdc92Q8VDN4 314 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Rnf25Q9QZR0 456 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Trpc2Q9R244 1172 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Bcl9lQ67FY2 1494 aa10.61□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ms4a14A0A087WSD2 1232 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gm5861F6VCN9 180 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 4933402N22RikF7D1B3 190 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Rplp2P99027 115 aaKnown RBP10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Muc3aQ3U5A2 218 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pitpnm3Q3UHE1 974 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gcnt3Q5JCT0 437 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Zdhhc15Q8BGJ0 337 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pcmtd2Q8BHD8 359 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Dyrk4Q8BI55 632 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ttc39bQ8BYY4 617 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 VcpkmtQ8C436 228 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Fam227bQ9D518 532 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Celf2Q9Z0H4 508 aaKnown RBP10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ccdc8D3YZV8 685 aa10.6□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms