RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 ARMCX2Q7L311 632 aa17.5■□□□□ 0.39
PHGDH-223ENST00000641597 TSSK1BQ9BXA7 367 aa17.5■□□□□ 0.39
PHGDH-223ENST00000641597 CEP41Q9BYV8 373 aa17.5■□□□□ 0.39
PHGDH-223ENST00000641597 GBA2Q9HCG7 927 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-223ENST00000641597 IKBKGQ9Y6K9 419 aa17.5■□□□□ 0.39
PHGDH-223ENST00000641597 BPTFQ12830 3046 aa17.5■□□□□ 0.39
PHGDH-223ENST00000641597 TSPAN1O60635 241 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 F7P08709 466 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-223ENST00000641597 CCND1P24385 295 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 PCK1P35558 622 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 GMPRP36959 345 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 HDAC4P56524 1084 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 IRX4P78413 519 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 RASA2Q15283 850 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 SULF1Q8IWU6 871 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 PYROXD2Q8N2H3 581 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 DENND2DQ9H6A0 471 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-223ENST00000641597 NOP53Q9NZM5 478 aaKnown RBP17.49■□□□□ 0.39
PHGDH-223ENST00000641597 MARCOQ9UEW3 520 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-223ENST00000641597 PEX11AO75192 247 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 DCTN3O75935 186 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 PDGFRBP09619 1106 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 CSH1P0DML2 217 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 CSH2P0DML3 217 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 SKIV2L2P42285 1042 aaKnown RBP17.49■□□□□ 0.39
PHGDH-223ENST00000641597 CPA2P48052 419 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 NEK3P51956 506 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 NAA25Q14CX7 972 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 MDH1BQ5I0G3 518 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 ZNF618Q5T7W0 954 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 LCLAT1Q6UWP7 414 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 NT5C1AQ9BXI3 368 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 CDHR5Q9HBB8 845 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 POPDC2Q9HBU9 364 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 ZC3H7BQ9UGR2 993 aaKnown RBP17.49■□□□□ 0.39
PHGDH-223ENST00000641597 MAD1L1Q9Y6D9 718 aa17.49■□□□□ 0.39
PHGDH-223ENST00000641597 C2CD2LO14523 706 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 SKAP2O75563 359 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-223ENST00000641597 ZBED1O96006 694 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 MCF2P10911 925 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 TTLL4Q14679 1199 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 ALYREFQ86V81 257 aaKnown RBP17.48■□□□□ 0.39
PHGDH-223ENST00000641597 SRPK1Q96SB4 655 aaKnown RBP17.48■□□□□ 0.39
PHGDH-223ENST00000641597 APOL6Q9BWW8 343 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 TMEM120AQ9BXJ8 343 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 ETNK2Q9NVF9 386 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 SNTG2Q9NY99 539 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 IL1RAPL1Q9NZN1 696 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 PPP2R3BQ9Y5P8 575 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 KITP10721 976 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 CCDC130P13994 396 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 ANKRD20A2Q5SQ80 823 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 ANKRD20A1Q5TYW2 823 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 ANKRD20A3Q5VUR7 823 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 FYB2Q5VWT5 728 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 MAMDC4Q6UXC1 1216 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 DSTYKQ6XUX3 929 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 RFX8Q6ZV50 586 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 APOPT1Q96IL0 206 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 ACAP3Q96P50 834 aa17.48■□□□□ 0.39
PHGDH-223ENST00000641597 EIF2AQ9BY44 585 aaKnown RBP17.48■□□□□ 0.39
PHGDH-223ENST00000641597 FAM49AQ9H0Q0 323 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-223ENST00000641597 GEMIN8Q9NWZ8 242 aaKnown RBP17.48■□□□□ 0.39
PHGDH-223ENST00000641597 APOL1O14791 398 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 ATP2A2P16615 1042 aaKnown RBP17.47■□□□□ 0.39
PHGDH-223ENST00000641597 ADORA2BP29275 332 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 STIP1P31948 543 aaKnown RBP17.47■□□□□ 0.39
PHGDH-223ENST00000641597 SERPINB4P48594 390 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 MRPS5P82675 430 aaKnown RBP17.47■□□□□ 0.39
PHGDH-223ENST00000641597 INCA1Q0VD86 236 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 ZNF534Q76KX8 674 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 ARMC2Q8NEN0 867 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 FBXO27Q8NI29 283 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 DCPSQ96C86 337 aaKnown RBP17.47■□□□□ 0.39
PHGDH-223ENST00000641597 FAM167BQ9BTA0 163 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 C20orf27Q9GZN8 174 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 DHX35Q9H5Z1 703 aaKnown RBP17.47■□□□□ 0.39
PHGDH-223ENST00000641597 ZNF638Q14966 1978 aaKnown RBP17.47■□□□□ 0.39
PHGDH-223ENST00000641597 HMX2A2RU54 273 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 NPTXRO95502 500 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 DHRS4L1P0CG22 281 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 ADORA2AP29274 412 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 RABGGTBP53611 331 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 HSF5Q4G112 596 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-223ENST00000641597 SLC45A4Q5BKX6 768 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 MROH9Q5TGP6 573 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 ZCCHC23Q6ZST2 131 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 CCDC185Q8N715 623 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 OPTNQ96CV9 577 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 VPS11Q9H270 941 aa17.47■□□□□ 0.39
PHGDH-223ENST00000641597 IQANK1A0A1B0GTG1 560 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 TM9SF1O15321 606 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 DLDP09622 509 aaKnown RBP17.46■□□□□ 0.39
PHGDH-223ENST00000641597 MYL2P10916 166 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 LCP1P13796 627 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 LMO2P25791 158 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 SDC4P31431 198 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 RBP5P82980 135 aa17.46■□□□□ 0.39
PHGDH-223ENST00000641597 PRKD1Q15139 912 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-223ENST00000641597 SOWAHAQ2M3V2 549 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms