RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 PTPN9P43378 593 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 DAOAP59103 153 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 GPM6BQ13491 265 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 C15orf59Q2T9L4 293 aaPredicted RBP13.7□□□□□ -0.22
PHGDH-221ENST00000641573 ATP13A4Q4VNC1 1196 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 RTP2Q5QGT7 225 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 ZFYVE27Q5T4F4 411 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 SH3PXD2AQ5TCZ1 1133 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 TXNRD3NBQ6F5E7 133 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 CCDC70Q6NSX1 233 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 KCNT2Q6UVM3 1135 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 POLNQ7Z5Q5 900 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 ADAT2Q7Z6V5 191 aaKnown RBP13.7□□□□□ -0.22
PHGDH-221ENST00000641573 CCDC50Q8IVM0 306 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 KLHL7Q8IXQ5 586 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 CFAP57Q96MR6 1250 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 ZNF558Q96NG5 402 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 KRT12Q99456 494 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 DDX23Q9BUQ8 820 aaKnown RBP13.7□□□□□ -0.22
PHGDH-221ENST00000641573 ANKZF1Q9H8Y5 726 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 ZWILCHQ9H900 591 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 CNGB3Q9NQW8 809 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 KLHL11Q9NVR0 708 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.7□□□□□ -0.22
PHGDH-221ENST00000641573 PCSK1NQ9UHG2 260 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 PCDHB5Q9Y5E4 795 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 MRPL42Q9Y6G3 142 aaKnown RBP13.7□□□□□ -0.22
PHGDH-221ENST00000641573 USP34Q70CQ2 3546 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 CFAP54Q96N23 3096 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 GOLGA6L10A0A0M3HER8 536 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 H3BNC9 293 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 SART1O43290 800 aaKnown RBP13.69□□□□□ -0.22
PHGDH-221ENST00000641573 TBC1D4O60343 1298 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 GLI1P08151 1106 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 DESP17661 470 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 LAG3P18627 525 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 IL1R2P27930 398 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 GRIK1P39086 918 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 CETN2P41208 172 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 ARPP19P56211 112 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 YWHAZP63104 245 aaKnown RBP13.69□□□□□ -0.22
PHGDH-221ENST00000641573 HTRA4P83105 476 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-221ENST00000641573 ATP11AP98196 1134 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 SMC1AQ14683 1233 aaKnown RBP13.69□□□□□ -0.22
PHGDH-221ENST00000641573 CDO1Q16878 200 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 USP41Q3LFD5 358 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 RAB6CQ53S08 254 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 ANKS3Q6ZW76 656 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 BMP8AQ7Z5Y6 402 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 RNF135Q8IUD6 432 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 SCN4BQ8IWT1 228 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 DEFB106AQ8N104 65 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 SLC39A11Q8N1S5 342 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 FAM172AQ8WUF8 416 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 ANKRD7Q92527 254 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 EDAQ92838 391 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 PBXIP1Q96AQ6 731 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 RNF25Q96BH1 459 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-221ENST00000641573 FAM149B1Q96BN6 582 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 ACSF2Q96CM8 615 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-221ENST00000641573 FUBP3Q96I24 572 aaKnown RBP eCLIP13.69□□□□□ -0.22
PHGDH-221ENST00000641573 RBM41Q96IZ5 413 aaKnown RBP13.69□□□□□ -0.22
PHGDH-221ENST00000641573 YME1L1Q96TA2 773 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 NCAPGQ9BPX3 1015 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 LRRC1Q9BTT6 524 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 VN1R3Q9BXE9 311 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 OXCT2Q9BYC2 517 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-221ENST00000641573 RAB6CQ9H0N0 254 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 PNPLA8Q9NP80 782 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 NGRNQ9NPE2 291 aaKnown RBP13.69□□□□□ -0.22
PHGDH-221ENST00000641573 ABI2Q9NYB9 513 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-221ENST00000641573 USP18Q9UMW8 372 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 NR2E1Q9Y466 385 aa13.69□□□□□ -0.22
PHGDH-221ENST00000641573 ZFHX2Q9C0A1 2572 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-221ENST00000641573 TCRBV7S2A1N4TA0A589 114 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 FSCN2O14926 492 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 ZBED1O96006 694 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 USP17L7P0C7H9 530 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 CPB1P15086 417 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 MATKP42679 507 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 MRPS25P82663 173 aaKnown RBP13.68□□□□□ -0.22
PHGDH-221ENST00000641573 LLGL1Q15334 1064 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 SMAD2Q15796 467 aaKnown RBP13.68□□□□□ -0.22
PHGDH-221ENST00000641573 GLE1Q53GS7 698 aaKnown RBP13.68□□□□□ -0.22
PHGDH-221ENST00000641573 ODF2Q5BJF6 829 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 C8orf74Q6P047 294 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 PRSS55Q6UWB4 352 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-221ENST00000641573 VSTM1Q6UX27 236 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 MFSD7Q6UXD7 560 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 RSPO2Q6UXX9 243 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-221ENST00000641573 RNF168Q8IYW5 571 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-221ENST00000641573 COLGALT1Q8NBJ5 622 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 SP7Q8TDD2 431 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-221ENST00000641573 RIN2Q8WYP3 895 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-221ENST00000641573 IRGQQ8WZA9 623 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 RAPGEF5Q92565 580 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 CENPIQ92674 756 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-221ENST00000641573 PGLYRP2Q96PD5 576 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 SLITRK1Q96PX8 696 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 SLC2A13Q96QE2 648 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms