RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 NPNTQ6UXI9 565 aa14.9□□□□□ -0.02
SCARB2-216ENST00000639300 CCDC90BQ9GZT6 254 aa14.9□□□□□ -0.02
SCARB2-216ENST00000639300 NR2E1Q9Y466 385 aa14.9□□□□□ -0.02
SCARB2-216ENST00000639300 YDJCA8MPS7 323 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 ZBTB24O43167 697 aaPredicted RBP14.89□□□□□ -0.03
SCARB2-216ENST00000639300 SUPT7LO94864 414 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 TNFRSF8P28908 595 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 NUDT2P50583 147 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 KBTBD12Q3ZCT8 623 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 DCP1BQ8IZD4 617 aaKnown RBP14.89□□□□□ -0.03
SCARB2-216ENST00000639300 ZCCHC9Q8N567 271 aaKnown RBP14.89□□□□□ -0.03
SCARB2-216ENST00000639300 TSPAN17Q96FV3 270 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 DDX43Q9NXZ2 648 aaKnown RBP14.89□□□□□ -0.03
SCARB2-216ENST00000639300 COL20A1Q9P218 1284 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 ARMCX1Q9P291 453 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 SLC30A1Q9Y6M5 507 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 PDHXO00330 501 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 BANF1O75531 89 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 MT-CO1P00395 513 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 F9P00740 461 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 RALBP11234 206 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 DRG2P55039 364 aaKnown RBP14.89□□□□□ -0.03
SCARB2-216ENST00000639300 RFWD2Q8NHY2 731 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 LRRC19Q9H756 370 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 NID2Q14112 1375 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 APOC4-APOC2K7ER74 178 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 C2CD2LO14523 706 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 TBC1D12O60347 775 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 ANXA9O76027 345 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 POMCP01189 267 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 APOC2P02655 101 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 IRF1P10914 325 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 SERPINB5P36952 375 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 CLK2P49760 499 aaKnown RBP14.89□□□□□ -0.03
SCARB2-216ENST00000639300 ZCCHC23Q6ZST2 131 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 TEX9Q8N6V9 391 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 SNX19Q92543 992 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 ZFYVE28Q9HCC9 887 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 CDYLQ9Y232 598 aa14.89□□□□□ -0.03
SCARB2-216ENST00000639300 IGLV3-22A0A075B6J6 115 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 E9PBE3 544 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 TPST1O60507 370 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 KLHL41O60662 606 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 PAEPP09466 180 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 MPP3Q13368 585 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 ITGA9Q13797 1035 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 DPYSL3Q14195 570 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 CNGA2Q16280 664 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 TEDDM1Q5T9Z0 273 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 CALML6Q8TD86 181 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 CDT1Q9H211 546 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 GOLGA8TH3BQL2 631 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 FSCN2O14926 492 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 KCNA4P22459 653 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 PTPN7P35236 360 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 SLC27A1Q6PCB7 646 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 AMIGO3Q86WK7 504 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 SUGP1Q8IWZ8 645 aaKnown RBP14.88□□□□□ -0.03
SCARB2-216ENST00000639300 ZNF75CPQ92670 426 aaPredicted RBP14.88□□□□□ -0.03
SCARB2-216ENST00000639300 SLITRK1Q96PX8 696 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 SRPK1Q96SB4 655 aaKnown RBP14.88□□□□□ -0.03
SCARB2-216ENST00000639300 ATXN3LQ9H3M9 355 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 RUVBL2Q9Y230 463 aaKnown RBP14.88□□□□□ -0.03
SCARB2-216ENST00000639300 LGALS2P05162 132 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 SETSIPP0DME0 302 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 ODC1P11926 461 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 CPA3P15088 417 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 HOXD10P28358 340 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 MMRN1Q13201 1228 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 TMED1Q13445 227 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 POU6F1Q14863 301 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 SZRD1Q7Z422 152 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 ATXN2LQ8WWM7 1075 aaKnown RBP14.88□□□□□ -0.03
SCARB2-216ENST00000639300 BSNDQ8WZ55 320 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 MUC3BQ9H195 1237 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 TMEM134Q9H6X4 195 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 LMCD1Q9NZU5 365 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 AKAP12Q02952 1782 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 AKAP10O43572 662 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 RECQL4O94761 1208 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 CCDC130P13994 396 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 IL10P22301 178 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 RPA3P35244 121 aaPredicted RBP14.88□□□□□ -0.03
SCARB2-216ENST00000639300 ABCG1P45844 678 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 NCKAP1LP55160 1127 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 FAM83EQ2M2I3 478 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 EXOC3L1Q86VI1 746 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 MSL3Q8N5Y2 521 aaKnown RBP14.88□□□□□ -0.03
SCARB2-216ENST00000639300 GLT1D1Q96MS3 346 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 TBCBQ99426 244 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 SYT15Q9BQS2 421 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 DCDC2Q9UHG0 476 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 MOSPD1Q9UJG1 213 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 COG5Q9UP83 839 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 PPP2R3BQ9Y5P8 575 aa14.88□□□□□ -0.03
SCARB2-216ENST00000639300 VIRMAQ69YN4 1812 aaKnown RBP14.88□□□□□ -0.03
SCARB2-216ENST00000639300 IGKV6D-41A0A0C4DH26 115 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 SIGLEC16A6NMB1 481 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 SNX3O60493 162 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 ZNF189O75820 626 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms