RNA–Protein interactions for RNA: ENST00000636102.1

ARHGEF9-223, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 2,112 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-223	ENST00000636102	TDRD10	Q5VZ19	366 aa	Known RBP	11.15	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	AADACL2	Q6P093	401 aa		11.15	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	RHBDF2	Q6PJF5	856 aa		11.15	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	PHF13	Q86YI8	300 aa	Predicted RBP	11.15	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CCNJL	Q8IV13	435 aa		11.15	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CGRRF1	Q99675	332 aa		11.15	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ZNF184	Q99676	751 aa	Predicted RBP	11.15	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CCDC77	Q9BR77	488 aa		11.15	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	PI4K2A	Q9BTU6	479 aa		11.15	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	RPF1	Q9H9Y2	349 aa	Known RBP	11.15	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	KCNK9	Q9NPC2	374 aa		11.15	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	NOD1	Q9Y239	953 aa		11.15	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TRPV2	Q9Y5S1	764 aa		11.15	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CASP8AP2	Q9UKL3	1982 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	LACTBL1	A8MY62	500 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	KBTBD13	C9JR72	458 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102		M0QZ92	97 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	ATMIN	O43313	823 aa	Predicted RBP	11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	ATP6V1G1	O75348	118 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	VNN1	O95497	513 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	LYN	P07948	512 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	CDK7	P50613	346 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	MAP7	Q14244	749 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	KHDC1	Q4VXA5	237 aa	Known RBP	11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	MON1B	Q7L1V2	547 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	KATNAL2	Q8IYT4	538 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	ANKRD42	Q8N9B4	389 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	SLC43A3	Q8NBI5	491 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	EXD1	Q8NHP7	514 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	NRG4	Q8WWG1	115 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	HIC2	Q96JB3	615 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	ADPGK	Q9BRR6	497 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	ASIC3	Q9UHC3	531 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	PIN4	Q9Y237	131 aa	Known RBP	11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	HES2	Q9Y543	173 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	CST3	P01034	146 aa	Predicted RBP	11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	HLA-DRA	P01903	254 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	ATF2	P15336	505 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	PIK3CA	P42336	1068 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	INHBC	P55103	352 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	TAP1	Q03518	808 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	PTPN11	Q06124	597 aa	Predicted RBP	11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	MGAT3	Q09327	533 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	PTK7	Q13308	1070 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	CUL2	Q13617	745 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	RCN1	Q15293	331 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	SURF1	Q15526	300 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	SLC10A6	Q3KNW5	377 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	SLC45A4	Q5BKX6	768 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	NOTUM	Q6P988	496 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	SLC27A1	Q6PCB7	646 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	TMEM130	Q8N3G9	435 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	RIBC1	Q8N443	379 aa	Predicted RBP	11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	GDAP1	Q8TB36	358 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	ZNF398	Q8TD17	642 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	DDX27	Q96GQ7	796 aa	Known RBP	11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	IMPG2	Q9BZV3	1241 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	DCLK3	Q9C098	648 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	SENP6	Q9GZR1	1112 aa	Predicted RBP	11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	CXCL16	Q9H2A7	254 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	SYNC	Q9H7C4	482 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	PARVA	Q9NVD7	372 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	NDUFA13	Q9P0J0	144 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	ST3GAL5	Q9UNP4	418 aa		11.14	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	UMODL1	Q5DID0	1318 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	ATP9B	O43861	1147 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	B4GALT4	O60513	344 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	ZWINT	O95229	277 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	PSMG1	O95456	288 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	TTC4	O95801	387 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	PABPC4L	P0CB38	370 aa	Known RBP	11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	HSPA8	P11142	646 aa	Known RBP	11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	RRM1	P23921	792 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	LBX1	P52954	281 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	SLC18A1	P54219	525 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	TFAM	Q00059	246 aa	Known RBP	11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	NFX1	Q12986	1120 aa	Known RBP	11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	MPP2	Q14168	576 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	LONRF1	Q17RB8	773 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	DUOXA2	Q1HG44	320 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	TRIM71	Q2Q1W2	868 aa	Known RBP	11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	LRRC38	Q5VT99	294 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	PLEKHA7	Q6IQ23	1121 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	DRICH1	Q6PGQ1	229 aa	Predicted RBP	11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	WDR49	Q8IV35	697 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	BTBD6	Q96KE9	485 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	ACAP3	Q96P50	834 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	SLX1A	Q9BQ83	275 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	ZNF518B	Q9C0D4	1074 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	MTMR12	Q9C0I1	747 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	IQCG	Q9H095	443 aa	Known RBP	11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	EPB41L1	Q9H4G0	881 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	AGO3	Q9H9G7	860 aa	Known RBP	11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	PPCS	Q9HAB8	311 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	SNTG2	Q9NY99	539 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	IP6K2	Q9UHH9	426 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	OGDHL	Q9ULD0	1010 aa		11.13	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	ARVCF	O00192	962 aa		11.12	□□□□□ -0.63
ARHGEF9-223	ENST00000636102	CCDC22	O60826	627 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms