RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 TBC1D31Q96DN5 1066 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 VMP1Q96GC9 406 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 HSFY1Q96LI6 401 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 CENPHQ9H3R5 247 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 ZWILCHQ9H900 591 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 RSAD1Q9HA92 442 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 PRM3Q9NNZ6 103 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 USP18Q9UMW8 372 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 CDY2AQ9Y6F7 541 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 MGAMO43451 1857 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 C2CD4BA6NLJ0 364 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 E5RJQ4 531 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 AKAP10O43572 662 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 PRPSAP2O60256 369 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 KRT10P13645 584 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 WARSP23381 471 aaKnown RBP7.47□□□□□ -1.21
BRCA1-230ENST00000634433 IVDP26440 423 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 MIPP30301 263 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 ITGA8P53708 1063 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 IRX5P78411 483 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-230ENST00000634433 PLCB3Q01970 1234 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 PDK2Q15119 407 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 FAM47CQ5HY64 1035 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 GLRA4Q5JXX5 417 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 KCTD16Q68DU8 428 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 FAM183BPQ6ZVS7 135 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 BBS12Q6ZW61 710 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 ARCQ7LC44 396 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 LIMS2Q7Z4I7 341 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 VSIG1Q86XK7 387 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 ALLCQ8N6M5 410 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 C12orf29Q8N999 325 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 SMG8Q8ND04 991 aaKnown RBP7.47□□□□□ -1.21
BRCA1-230ENST00000634433 TRPV1Q8NER1 839 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 SLC35F5Q8WV83 523 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 RXFP2Q8WXD0 754 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 TBCBQ99426 244 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 CCDC77Q9BR77 488 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 HERPUD2Q9BSE4 406 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 KLK14Q9P0G3 267 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 CALCOCO1Q9P1Z2 691 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 TBK1Q9UHD2 729 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 NEU2Q9Y3R4 380 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 A0A1W2PPC1 479 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 C3orf70A6NLC5 250 aaPredicted RBP7.46□□□□□ -1.21
BRCA1-230ENST00000634433 SRRM3A6NNA2 597 aaPredicted RBP7.46□□□□□ -1.21
BRCA1-230ENST00000634433 PPEF2O14830 753 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 RIPK2O43353 540 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 LZTS3O60299 673 aaPredicted RBP7.46□□□□□ -1.21
BRCA1-230ENST00000634433 PFKMP08237 780 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 TCF4P15884 667 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 KLRC2P26717 231 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 HOXD10P28358 340 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 SDC4P31431 198 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 HALP42357 657 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 PPM1FP49593 454 aaPredicted RBP7.46□□□□□ -1.21
BRCA1-230ENST00000634433 FLT3LGP49771 235 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 IZUMO3Q5VZ72 239 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 RHBDF2Q6PJF5 856 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 CCDC25Q86WR0 208 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 LMNTD2Q8IXW0 634 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 TMEM130Q8N3G9 435 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 EMC1Q8N766 993 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 PCSK9Q8NBP7 692 aaKnown RBP7.46□□□□□ -1.21
BRCA1-230ENST00000634433 TEKT4Q8WW24 435 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 PGM2Q96G03 612 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 RNF39Q9H2S5 420 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 CNOT10Q9H9A5 744 aaKnown RBP7.46□□□□□ -1.21
BRCA1-230ENST00000634433 KLHL11Q9NVR0 708 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 TJP2Q9UDY2 1190 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 DNPEPQ9ULA0 475 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 ST3GAL5Q9UNP4 418 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 GIT1Q9Y2X7 761 aa7.46□□□□□ -1.21
BRCA1-230ENST00000634433 RGS16O15492 202 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-230ENST00000634433 CST8O60676 142 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 CABYRO75952 493 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 SKIP12755 728 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 DNAJB2P25686 324 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 ATP5DP30049 168 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 RGS7P49802 495 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 IRAK1P51617 712 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 LILRA4P59901 499 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 SLC29A2Q14542 456 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 ZKSCAN8Q15776 578 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-230ENST00000634433 OCLNQ16625 522 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 ZSCAN26Q16670 478 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 EFHC1Q5JVL4 640 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 TXNRD3NBQ6F5E7 133 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 GDF6Q6KF10 455 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-230ENST00000634433 PMF1Q6P1K2 205 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 CFAP161Q6P656 301 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 OLFML1Q6UWY5 402 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 CXCL17Q6UXB2 119 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 UBE2Q1Q7Z7E8 422 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 SERINC5Q86VE9 423 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 RFX6Q8HWS3 928 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 ADGRF2Q8IZF7 708 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 TMEM86AQ8N2M4 240 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 ARFGAP1Q8N6T3 406 aa7.46□□□□□ -1.22
BRCA1-230ENST00000634433 OR2W6PQ8NHA6 318 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms