RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 RRP36Q96EU6 259 aaKnown RBP6.34□□□□□ -1.39
LINC00254-202ENST00000633813 KCNH6Q9H252 994 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 FOXP1Q9H334 677 aaPredicted RBP6.34□□□□□ -1.39
LINC00254-202ENST00000633813 VCPKMTQ9H867 229 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 AS3MTQ9HBK9 375 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 TYW1Q9NV66 732 aaKnown RBP6.34□□□□□ -1.39
LINC00254-202ENST00000633813 TUBD1Q9UJT1 453 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 REXO2Q9Y3B8 237 aaKnown RBP6.34□□□□□ -1.39
LINC00254-202ENST00000633813 PCDHGA9Q9Y5G4 932 aaKnown RBP6.34□□□□□ -1.39
LINC00254-202ENST00000633813 PCDHGA8Q9Y5G5 932 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 PCDHGA7Q9Y5G6 932 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 PCDHGA6Q9Y5G7 932 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 PCDHGA3Q9Y5H0 932 aa6.34□□□□□ -1.39
LINC00254-202ENST00000633813 UTRNP46939 3433 aa6.34□□□□□ -1.4
LINC00254-202ENST00000633813 FRMPD2Q68DX3 1309 aaPredicted RBP6.33□□□□□ -1.4
LINC00254-202ENST00000633813 hCG_1642624A0A1W2PR95 340 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 C19orf81C9J6K1 198 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 ADM5C9JUS6 153 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 UBE2Q2LH0YL09 131 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 PLA2G6O60733 806 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 SNUPNO95149 360 aaKnown RBP6.33□□□□□ -1.4
LINC00254-202ENST00000633813 RPLP2P05387 115 aaKnown RBP6.33□□□□□ -1.4
LINC00254-202ENST00000633813 SPATA31D3P0C874 917 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 MAKP20794 623 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 CALML3P27482 149 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 APOBEC3AP31941 199 aaPredicted RBP6.33□□□□□ -1.4
LINC00254-202ENST00000633813 RECQLP46063 649 aaPredicted RBP6.33□□□□□ -1.4
LINC00254-202ENST00000633813 USP14P54578 494 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 KIF23Q02241 960 aaPredicted RBP6.33□□□□□ -1.4
LINC00254-202ENST00000633813 ABHD18Q0P651 414 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 CCDC96Q2M329 555 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 SLC35G1Q2M3R5 365 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 GALNT17Q6IS24 598 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 SPATA31D4Q6ZUB0 917 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 ADGRF4Q8IZF3 695 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 ZNF276Q8N554 614 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 RNF169Q8NCN4 708 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 SLC35B2Q8TB61 432 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 CCDC12Q8WUD4 166 aaPredicted RBP6.33□□□□□ -1.4
LINC00254-202ENST00000633813 CHURC1Q8WUH1 139 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 LPAR1Q92633 364 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 ZKSCAN4Q969J2 545 aaPredicted RBP6.33□□□□□ -1.4
LINC00254-202ENST00000633813 CEP89Q96ST8 783 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 MRI1Q9BV20 369 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 REXO4Q9GZR2 422 aaKnown RBP6.33□□□□□ -1.4
LINC00254-202ENST00000633813 SCAND2PQ9GZW5 306 aaPredicted RBP6.33□□□□□ -1.4
LINC00254-202ENST00000633813 UBA5Q9GZZ9 404 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 LDAHQ9H6V9 325 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 JMJD4Q9H9V9 463 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 VAT1LQ9HCJ6 419 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 GJB4Q9NTQ9 266 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 TDP1Q9NUW8 608 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 BARHL2Q9NY43 387 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 VPS54Q9P1Q0 977 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 SEC63Q9UGP8 760 aaKnown RBP6.33□□□□□ -1.4
LINC00254-202ENST00000633813 SRRDQ9UH36 339 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 CFAP45Q9UL16 551 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 SIK3Q9Y2K2 1263 aa6.33□□□□□ -1.4
LINC00254-202ENST00000633813 GREB1LQ9C091 1923 aaPredicted RBP6.33□□□□□ -1.4
LINC00254-202ENST00000633813 SRCAPQ6ZRS2 3230 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 GRXCR1A8MXD5 290 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 BTBD18B2RXH4 712 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 TMEM232C9JQI7 657 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 ZBTB5O15062 677 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 FSHBP01225 129 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 ALDH1A3P47895 512 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 SLC6A9P48067 706 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 STAT2P52630 851 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 ADKP55263 362 aaKnown RBP6.32□□□□□ -1.4
LINC00254-202ENST00000633813 BACE1P56817 501 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 NLRP5P59047 1200 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 RAP2BP61225 183 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 NHLH2Q02577 135 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 TRAF1Q13077 416 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 SPP2Q13103 211 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 RASGRP2Q7LDG7 609 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 GDF7Q7Z4P5 450 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 RSPH3Q86UC2 560 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 ZBTB46Q86UZ6 589 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 FAM160B2Q86V87 743 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 DIS3L2Q8IYB7 885 aaKnown RBP6.32□□□□□ -1.4
LINC00254-202ENST00000633813 ANKRD13AQ8IZ07 590 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 RPUSD2Q8IZ73 545 aaKnown RBP6.32□□□□□ -1.4
LINC00254-202ENST00000633813 SPICE1Q8N0Z3 855 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 MIER2Q8N344 545 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 CCDC148Q8NFR7 591 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 OR2I1PQ8NGU4 316 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 STON2Q8WXE9 905 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 PIBF1Q8WXW3 757 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 HAS1Q92839 578 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 CDCA5Q96FF9 252 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 ZNF396Q96N95 335 aaPredicted RBP6.32□□□□□ -1.4
LINC00254-202ENST00000633813 PIGSQ96S52 555 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 ZMYND12Q9H0C1 365 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 CPVLQ9H3G5 476 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 TMPRSS5Q9H3S3 457 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 TRPM5Q9NZQ8 1165 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 FEM1BQ9UK73 627 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 KCNJ14Q9UNX9 436 aa6.32□□□□□ -1.4
LINC00254-202ENST00000633813 HS3ST3A1Q9Y663 406 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms