RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SHMT1P34896 483 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 EPHB3P54753 998 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 NME5P56597 212 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 TGFB2P61812 414 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 DEFB132Q7Z7B7 95 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 ZMAT2Q96NC0 199 aaKnown RBP13.2□□□□□ -0.3
SCN8A-209ENST00000627620 RMND5AQ9H871 391 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 EFCAB1Q9HAE3 211 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 RGL2O15211 777 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 PRKCQQ04759 706 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 GLP2RO95838 553 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 MAPK1P28482 360 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 VHLP40337 213 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 ATN1P54259 1190 aaPredicted RBP13.2□□□□□ -0.3
SCN8A-209ENST00000627620 PWP1Q13610 501 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 IYDQ6PHW0 289 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 HERC6Q8IVU3 1022 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 MICU2Q8IYU8 434 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 COLGALT1Q8NBJ5 622 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 L2HGDHQ9H9P8 463 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 UBP1Q9NZI7 540 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 SOX13Q9UN79 622 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 ACOT9Q9Y305 439 aa13.2□□□□□ -0.3
SCN8A-209ENST00000627620 CNTNAP2Q9UHC6 1331 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 HNRNPCP07910 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
SCN8A-209ENST00000627620 GRIK4Q16099 956 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 NFE2Q16621 373 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-209ENST00000627620 SEL1L3Q68CR1 1132 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 GPAMQ9HCL2 828 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 BATF3Q9NR55 127 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 DNAJC16Q9Y2G8 782 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 TIMM13Q9Y5L4 95 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-209ENST00000627620 RBP1P09455 135 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 MAPTP10636 758 aaKnown RBP13.19□□□□□ -0.3
SCN8A-209ENST00000627620 CNTFP26441 200 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 NCKAP1LP55160 1127 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 CYP51A1Q16850 503 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 TTC33Q6PID6 262 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-209ENST00000627620 CCDC81Q6ZN84 652 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 DNAAF5Q86Y56 855 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 HAO1Q9UJM8 370 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 BARX2Q9UMQ3 279 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-209ENST00000627620 PPRC1Q5VV67 1664 aaKnown RBP13.19□□□□□ -0.3
SCN8A-209ENST00000627620 PLA2G6O60733 806 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 RNASEH1O60930 286 aaKnown RBP13.19□□□□□ -0.3
SCN8A-209ENST00000627620 USP1O94782 785 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 VIL1P09327 827 aaKnown RBP13.19□□□□□ -0.3
SCN8A-209ENST00000627620 GPC1P35052 558 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 CHI3L1P36222 383 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-209ENST00000627620 SLC16A1P53985 500 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 SYT15Q9BQS2 421 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 ADGRE3Q9BY15 652 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 CAAP1Q9H8G2 361 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 SYTL2Q9HCH5 934 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 SPACA6W5XKT8 324 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 ALDH2P05091 517 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 TGFB3P10600 412 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 RFX3P48380 749 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
SCN8A-209ENST00000627620 CSHL1Q14406 222 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 ERMARDQ5T6L9 678 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 SLC44A2Q8IWA5 706 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-209ENST00000627620 ACTL9Q8TC94 416 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 CNBD2Q96M20 576 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 IMPAD1Q9NX62 359 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 TSPAN16Q9UKR8 245 aa13.19□□□□□ -0.3
SCN8A-209ENST00000627620 KPNA6O60684 536 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 POMCP01189 267 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 AQP5P55064 265 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 KCNMA1Q12791 1236 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 MPP3Q13368 585 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 NFIL3Q16649 462 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 FAM83AQ86UY5 434 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 KIAA0895Q8NCT3 520 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 CYP2W1Q8TAV3 490 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 COPS7BQ9H9Q2 264 aaPredicted RBP13.18□□□□□ -0.3
SCN8A-209ENST00000627620 IL17RBQ9NRM6 502 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 TCRBV5S4A2TA0A5A2 114 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 SCNN1BP51168 640 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 ITIH4Q14624 930 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 MFSD4BQ5TF39 518 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 PTAR1Q7Z6K3 402 aaPredicted RBP13.18□□□□□ -0.3
SCN8A-209ENST00000627620 TRIM69Q86WT6 500 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 MCOLN2Q8IZK6 566 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 DNAJB3Q8WWF6 145 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 EDEM1Q92611 657 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 KIAA1683Q9H0B3 1180 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 USE1Q9NZ43 259 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 ADAMTS13Q76LX8 1427 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 VCLP18206 1134 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 HSPA13P48723 471 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 KPNA1P52294 538 aaPredicted RBP13.18□□□□□ -0.3
SCN8A-209ENST00000627620 NDST1P52848 882 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 SFSWAPQ12872 951 aaKnown RBP13.18□□□□□ -0.3
SCN8A-209ENST00000627620 CSTF3Q12996 717 aaKnown RBP13.18□□□□□ -0.3
SCN8A-209ENST00000627620 PGS1Q32NB8 556 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 SLC30A10Q6XR72 485 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 ILDR2Q71H61 639 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 KIAA2013Q8IYS2 634 aa13.18□□□□□ -0.3
SCN8A-209ENST00000627620 STN1Q9H668 368 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms