RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 HS6ST2Q96MM7 605 aa3.74□□□□□ -1.81
PTP4A2-220ENST00000627328 ZNF287Q9HBT7 754 aa3.74□□□□□ -1.81
PTP4A2-220ENST00000627328 TRNAU1APQ9NX07 287 aaKnown RBP3.74□□□□□ -1.81
PTP4A2-220ENST00000627328 KLHL13Q9P2N7 655 aa3.74□□□□□ -1.81
PTP4A2-220ENST00000627328 DKK4Q9UBT3 224 aa3.74□□□□□ -1.81
PTP4A2-220ENST00000627328 STEAP1Q9UHE8 339 aa3.74□□□□□ -1.81
PTP4A2-220ENST00000627328 TCEAL9Q9UHQ7 104 aa3.74□□□□□ -1.81
PTP4A2-220ENST00000627328 HDAC9Q9UKV0 1011 aa3.74□□□□□ -1.81
PTP4A2-220ENST00000627328 CAPN11Q9UMQ6 739 aa3.74□□□□□ -1.81
PTP4A2-220ENST00000627328 AFG3L2Q9Y4W6 797 aa3.74□□□□□ -1.81
PTP4A2-220ENST00000627328 H7C4K7 107 aa3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 FOXN3O00409 490 aaPredicted RBP3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 EXOC5O00471 708 aa3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 SNX2O60749 519 aa3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 SCGB1D2O95969 90 aa3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 PARP1P09874 1014 aaKnown RBP3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 ZKSCAN1P17029 563 aaPredicted RBP3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 FOXG1P55316 489 aaPredicted RBP3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 HSF1Q00613 529 aa3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 SRSF1Q07955 248 aaKnown RBP eCLIP3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 KCNB1Q14721 858 aa3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 PLEKHG6Q3KR16 790 aa3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 SHC4Q6S5L8 630 aa3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 DCDC5Q6ZRR9 648 aa3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 MAFAQ8NHW3 353 aaPredicted RBP3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 MAP4K1Q92918 833 aa3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 SIGLEC11Q96RL6 698 aa3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 STK31Q9BXU1 1019 aa3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 SPRTNQ9H040 489 aaPredicted RBP3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 ZNF580Q9UK33 172 aa3.73□□□□□ -1.81
PTP4A2-220ENST00000627328 INSIG1O15503 277 aa3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 CNOT3O75175 753 aaKnown RBP3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 USP12O75317 370 aa3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 MYBP10242 640 aa3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 ATF7P17544 494 aaPredicted RBP3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 RPS16P62249 146 aaKnown RBP3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 RPS13P62277 151 aaKnown RBP3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 ATG9BQ674R7 924 aa3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 ZNF517Q6ZMY9 492 aaPredicted RBP3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 KCTD20Q7Z5Y7 419 aa3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 TECPR1Q7Z6L1 1165 aa3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 COL23A1Q86Y22 540 aaPredicted RBP3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 C16orf71Q8IYS4 520 aaPredicted RBP3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 WDYHV1Q96HA8 205 aa3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 ZBTB45Q96K62 511 aaPredicted RBP3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 STRBPQ96SI9 672 aaKnown RBP3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 CHST8Q9H2A9 424 aa3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 COL20A1Q9P218 1284 aa3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 DNAJB11Q9UBS4 358 aa3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 NOB1Q9ULX3 412 aaKnown RBP3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 EID1Q9Y6B2 187 aa3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 ZMYM2Q9UBW7 1377 aa3.72□□□□□ -1.81
PTP4A2-220ENST00000627328 SPATA31A1Q5TZJ5 1347 aa3.71□□□□□ -1.81
PTP4A2-220ENST00000627328 LY6G6EA0A0G2JKS1 128 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 PRR23D1E9PI22 279 aaPredicted RBP3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 RAB27BO00194 218 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 PRR23D2P0DMB1 279 aaPredicted RBP3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 HGFP14210 728 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 BTF3P20290 206 aaKnown RBP3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 ADRA1DP25100 572 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 ID2Q02363 134 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 GBX1Q14549 363 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 RBMS2Q15434 407 aaKnown RBP3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 GFOD2Q3B7J2 385 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 C3orf38Q5JPI3 329 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 TMTC4Q5T4D3 741 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 PLAG1Q6DJT9 500 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 PPP4R4Q6NUP7 873 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 CCDC149Q6ZUS6 474 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 MPLKIPQ8TAP9 179 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 EDC3Q96F86 508 aaKnown RBP3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 VCPIP1Q96JH7 1222 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 FAM227BQ96M60 508 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 HIST1H2AAQ96QV6 131 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 WACQ9BTA9 647 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 CINPQ9BW66 212 aaPredicted RBP3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 BTBD1Q9H0C5 482 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 MTMR4Q9NYA4 1195 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 MID2Q9UJV3 735 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 RIMKLBQ9ULI2 386 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 FZD4Q9ULV1 537 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 COL15A1P39059 1388 aa3.71□□□□□ -1.82
PTP4A2-220ENST00000627328 CLIC1O00299 241 aa3.7□□□□□ -1.82
PTP4A2-220ENST00000627328 TPP1O14773 563 aa3.7□□□□□ -1.82
PTP4A2-220ENST00000627328 TLR2O60603 784 aa3.7□□□□□ -1.82
PTP4A2-220ENST00000627328 OAZ2O95190 189 aa3.7□□□□□ -1.82
PTP4A2-220ENST00000627328 NTN1O95631 604 aa3.7□□□□□ -1.82
PTP4A2-220ENST00000627328 MAP4K4O95819 1239 aaPredicted RBP3.7□□□□□ -1.82
PTP4A2-220ENST00000627328 IL1R1P14778 569 aa3.7□□□□□ -1.82
PTP4A2-220ENST00000627328 PEX2P28328 305 aa3.7□□□□□ -1.82
PTP4A2-220ENST00000627328 RBL1P28749 1068 aa3.7□□□□□ -1.82
PTP4A2-220ENST00000627328 TACR3P29371 465 aa3.7□□□□□ -1.82
PTP4A2-220ENST00000627328 TKTP29401 623 aaKnown RBP3.7□□□□□ -1.82
PTP4A2-220ENST00000627328 THBS4P35443 961 aa3.7□□□□□ -1.82
PTP4A2-220ENST00000627328 CARSP49589 748 aaKnown RBP3.7□□□□□ -1.82
PTP4A2-220ENST00000627328 EIF4A1P60842 406 aaKnown RBP3.7□□□□□ -1.82
PTP4A2-220ENST00000627328 TXNL4AP83876 142 aaKnown RBP3.7□□□□□ -1.82
PTP4A2-220ENST00000627328 CFHR1Q03591 330 aa3.7□□□□□ -1.82
PTP4A2-220ENST00000627328 STK3Q13188 491 aa3.7□□□□□ -1.82
PTP4A2-220ENST00000627328 MFSD13AQ14CX5 517 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms