RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 GAB3Q8WWW8 586 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 WBP2Q969T9 261 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 RMDN1Q96DB5 314 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 HHIPQ96QV1 700 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 CDK5RAP1Q96SZ6 601 aaKnown RBP11.41□□□□□ -0.58
SSBP4-215ENST00000625926 ARHGEF4Q9NR80 690 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 SPHK2Q9NRA0 654 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 POLR3BQ9NW08 1133 aaPredicted RBP11.41□□□□□ -0.58
SSBP4-215ENST00000625926 CLIC5Q9NZA1 410 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 LSM7Q9UK45 103 aaKnown RBP11.41□□□□□ -0.58
SSBP4-215ENST00000625926 KIAA1257Q9ULG3 409 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 USP18Q9UMW8 372 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 DMDP11532 3685 aa11.41□□□□□ -0.58
SSBP4-215ENST00000625926 DMXL1Q9Y485 3027 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 PRR5-ARHGAP8B1AHC4 643 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 AXIN1O15169 862 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 P4HA2O15460 535 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 HOXC11O43248 304 aaPredicted RBP11.4□□□□□ -0.58
SSBP4-215ENST00000625926 GREM1O60565 184 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 LRP3O75074 770 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 CCDC192P0DO97 292 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 VDRP11473 427 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 CD19P15391 556 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 SDHBP21912 280 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 TGM1P22735 817 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 TNFRSF4P43489 277 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 UBE2HP62256 183 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 ARHGAP8P85298 464 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 LMNB2Q03252 620 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 SPEM2Q0P670 501 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 RAB41Q5JT25 222 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 C10orf120Q5SQS8 335 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 NUDT18Q6ZVK8 323 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 CACNA2D4Q7Z3S7 1137 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 C12orf40Q86WS4 652 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 TMEM25Q86YD3 366 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 FAM160A2Q8N612 972 aaPredicted RBP11.4□□□□□ -0.58
SSBP4-215ENST00000625926 NAT16Q8N8M0 369 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 TRIML1Q8N9V2 468 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 TSTD1Q8NFU3 115 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 NT5C1BQ96P26 610 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 CHMP5Q9NZZ3 219 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 DEC1Q9P2X7 70 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 HESX1Q9UBX0 185 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 EBF1Q9UH73 591 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 NUDT5Q9UKK9 219 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 TSPAN16Q9UKR8 245 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 CTNND2Q9UQB3 1225 aa11.4□□□□□ -0.58
SSBP4-215ENST00000625926 TBC1D3BA6NDS4 549 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 MDM4O15151 490 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 TULP3O75386 442 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 FGFR1OPO95684 399 aaKnown RBP11.39□□□□□ -0.59
SSBP4-215ENST00000625926 ZBED1O96006 694 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 PAEPP09466 180 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 TKTL1P51854 596 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 DGKEP52429 567 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 BCAT1P54687 386 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 STX17P56962 302 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 COG7P83436 770 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 PDE4CQ08493 712 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 PAK1Q13153 545 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 PUM1Q14671 1186 aaKnown RBP eCLIP11.39□□□□□ -0.59
SSBP4-215ENST00000625926 CRY1Q16526 586 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 GOLGA7BQ2TAP0 167 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 HSF5Q4G112 596 aaPredicted RBP11.39□□□□□ -0.59
SSBP4-215ENST00000625926 TTC30AQ86WT1 665 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 MIB1Q86YT6 1006 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 ETFBKMTQ8IXQ9 262 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 CCDC33Q8N5R6 958 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 UBR7Q8N806 425 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 EHBP1Q8NDI1 1231 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 KCNV2Q8TDN2 545 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 LOXL4Q96JB6 756 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 SRRTQ9BXP5 876 aaKnown RBP11.39□□□□□ -0.59
SSBP4-215ENST00000625926 LRRC4Q9HBW1 653 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 PARD6AQ9NPB6 346 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 SEMA4GQ9NTN9 838 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 WDR35Q9P2L0 1181 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 MMP17Q9ULZ9 603 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 NCOR2Q9Y618 2525 aa11.39□□□□□ -0.59
SSBP4-215ENST00000625926 ANTXRLA6NF34 631 aa11.38□□□□□ -0.59
SSBP4-215ENST00000625926 XPO1O14980 1071 aaKnown RBP11.38□□□□□ -0.59
SSBP4-215ENST00000625926 FOXD2O60548 495 aaPredicted RBP11.38□□□□□ -0.59
SSBP4-215ENST00000625926 ALDH1A2O94788 518 aa11.38□□□□□ -0.59
SSBP4-215ENST00000625926 TIE1P35590 1138 aa11.38□□□□□ -0.59
SSBP4-215ENST00000625926 MARSP56192 900 aaKnown RBP11.38□□□□□ -0.59
SSBP4-215ENST00000625926 YWHAGP61981 247 aaKnown RBP eCLIP11.38□□□□□ -0.59
SSBP4-215ENST00000625926 KDSRQ06136 332 aa11.38□□□□□ -0.59
SSBP4-215ENST00000625926 MESP2Q0VG99 397 aa11.38□□□□□ -0.59
SSBP4-215ENST00000625926 BST2Q10589 180 aaKnown RBP11.38□□□□□ -0.59
SSBP4-215ENST00000625926 EFEMP1Q12805 493 aa11.38□□□□□ -0.59
SSBP4-215ENST00000625926 KCNH2Q12809 1159 aa11.38□□□□□ -0.59
SSBP4-215ENST00000625926 CSRP2Q16527 193 aa11.38□□□□□ -0.59
SSBP4-215ENST00000625926 CAMK4Q16566 473 aa11.38□□□□□ -0.59
SSBP4-215ENST00000625926 RSPO4Q2I0M5 234 aaPredicted RBP11.38□□□□□ -0.59
SSBP4-215ENST00000625926 USP39Q53GS9 565 aaKnown RBP11.38□□□□□ -0.59
SSBP4-215ENST00000625926 EOGTQ5NDL2 527 aa11.38□□□□□ -0.59
SSBP4-215ENST00000625926 EMC10Q5UCC4 262 aa11.38□□□□□ -0.59
SSBP4-215ENST00000625926 PM20D1Q6GTS8 502 aa11.38□□□□□ -0.59
SSBP4-215ENST00000625926 TMEM270Q6UE05 265 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms