RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 RNF111Q6ZNA4 994 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 RFX8Q6ZV50 586 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 OTOP1Q7RTM1 612 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 GPR180Q86V85 440 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 ARHGEF19Q8IW93 802 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 SIX5Q8N196 739 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 GMCL1P1Q8NEA9 526 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 ZSWIM2Q8NEG5 633 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 PDZD8Q8NEN9 1154 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 ANGPTL6Q8NI99 470 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 LMO3Q8TAP4 145 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 RAB3IL1Q8TBN0 382 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 TRUB1Q8WWH5 349 aaKnown RBP7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 KAT5Q92993 513 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 TAMM41Q96BW9 452 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 GMCL1Q96IK5 515 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 ZDHHC15Q96MV8 337 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 GCNAQ96QF7 691 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 FERMT1Q9BQL6 677 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 PLVAPQ9BX97 442 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 FOXP3Q9BZS1 431 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 C12orf10Q9HB07 376 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 ARMC1Q9NVT9 282 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 USP21Q9UK80 565 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 DNAJC16Q9Y2G8 782 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 TCRBV7S2A1N4TA0A589 114 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 KRBA1A5PL33 1030 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 FOXO6A8MYZ6 492 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 FOXN3O00409 490 aaPredicted RBP7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 AREL1O15033 823 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 ATMINO43313 823 aaPredicted RBP7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 FKBP9O95302 570 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 CRYZL1O95825 349 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 GH2P01242 217 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 CYP3A4P08684 503 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 ZNF76P36508 570 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 ALDH1A3P47895 512 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 KPNA1P52294 538 aaPredicted RBP7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 CDK18Q07002 472 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 TUBA3CQ13748 450 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 EFTUD2Q15029 972 aaKnown RBP eCLIP7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 SLC1A5Q15758 541 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 SLC15A2Q16348 729 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 NFIL3Q16649 462 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 LRRC36Q1X8D7 754 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 ABCB5Q2M3G0 1257 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 HP1BP3Q5SSJ5 553 aaPredicted RBP7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 RARS2Q5T160 578 aaKnown RBP7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 NANOGP8Q6NSW7 305 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 C11orf63Q6NUN7 778 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 LVRNQ6Q4G3 990 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 CCDC81Q6ZN84 652 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 ZNF720Q7Z2F6 126 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 DAW1Q8N136 415 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 TRIML2Q8N7C3 387 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 RDH13Q8NBN7 331 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 TSPAN14Q8NG11 270 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 TBC1D15Q8TC07 691 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 PYDC1Q8WXC3 89 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 ATL1Q8WXF7 558 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 TMA16Q96EY4 203 aaKnown RBP7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 NLRP4Q96MN2 994 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 C7orf26Q96N11 449 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 C2orf49Q9BVC5 232 aaPredicted RBP7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 TSSK1BQ9BXA7 367 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 SLC2A11Q9BYW1 496 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 HIPK3Q9H422 1215 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 FBXO6Q9NRD1 293 aaPredicted RBP7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 APEX2Q9UBZ4 518 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 PRR12Q9ULL5 1215 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 SOX13Q9UN79 622 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 PCDHGA11Q9Y5H2 935 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 IVNS1ABPQ9Y6Y0 642 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 A0A1W2PQ67 120 aa7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 SYCE1LA8MT33 242 aa7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 CFAP99D6REC4 459 aa7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 TM9SF1O15321 606 aa7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 BMP10O95393 424 aa7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 FOSP01100 380 aaPredicted RBP7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 ABCB1P08183 1280 aaPredicted RBP7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 POLR2MP0CAP2 368 aa7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 BMP3P12645 472 aa7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 RCVRNP35243 200 aa7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 RPA3P35244 121 aaPredicted RBP7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 CHKAP35790 457 aa7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 ETV3P41162 512 aa7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 ECE1P42892 770 aa7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 AP3M2P53677 418 aa7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 HIRAP54198 1017 aaPredicted RBP7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 ZNF200P98182 395 aaPredicted RBP7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 CHRNEQ04844 493 aa7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 PTK6Q13882 451 aa7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 CCNIQ14094 377 aa7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 PSMD6Q15008 389 aa7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 SF3B4Q15427 424 aaKnown RBP eCLIP7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 OASLQ15646 514 aaKnown RBP7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 CLEC16AQ2KHT3 1053 aa7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 C15orf59Q2T9L4 293 aaPredicted RBP7.76□□□□□ -1.17
TRIM49B-202ENST00000622138 TRIM16LQ309B1 348 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms