RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 SMCR8Q8TEV9 937 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-229ENST00000621897 KAZALD1Q96I82 304 aa5.27□□□□□ -1.57
BRCA1-229ENST00000621897 STRBPQ96SI9 672 aaKnown RBP5.27□□□□□ -1.57
BRCA1-229ENST00000621897 BRIP1Q9BX63 1249 aa5.27□□□□□ -1.57
BRCA1-229ENST00000621897 VPS16Q9H269 839 aa5.27□□□□□ -1.57
BRCA1-229ENST00000621897 DDX21Q9NR30 783 aaKnown RBP eCLIP5.27□□□□□ -1.57
BRCA1-229ENST00000621897 NKX1-2Q9UD57 310 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-229ENST00000621897 HPSEQ9Y251 543 aa5.27□□□□□ -1.57
BRCA1-229ENST00000621897 ZNF521Q96K83 1311 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 A8MVJ9 347 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 H3BNC9 293 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 ADAM10O14672 748 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 CA12O43570 354 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 INMTO95050 263 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 ANXA2P07355 339 aaKnown RBP5.26□□□□□ -1.57
BRCA1-229ENST00000621897 PHKG2P15735 406 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 YY1P25490 414 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 PIK3CBP42338 1070 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 MMP13P45452 471 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 CFHR3Q02985 330 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 DENND2CQ68D51 928 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 DGKHQ86XP1 1220 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 Q8N9P0 234 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-229ENST00000621897 IPCEF1Q8WWN9 437 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-229ENST00000621897 MAP4K1Q92918 833 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 EDC3Q96F86 508 aaKnown RBP5.26□□□□□ -1.57
BRCA1-229ENST00000621897 ZNF668Q96K58 619 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-229ENST00000621897 FAM118BQ9BPY3 351 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 NUP62CLQ9H1M0 184 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 ELOVL5Q9NYP7 299 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 STEAP1Q9UHE8 339 aa5.26□□□□□ -1.57
BRCA1-229ENST00000621897 PPEF2O14830 753 aa5.25□□□□□ -1.57
BRCA1-229ENST00000621897 PRAMEF2O60811 474 aa5.25□□□□□ -1.57
BRCA1-229ENST00000621897 PQBP1O60828 265 aaKnown RBP5.25□□□□□ -1.57
BRCA1-229ENST00000621897 RBL1P28749 1068 aa5.25□□□□□ -1.57
BRCA1-229ENST00000621897 PTGER1P34995 402 aa5.25□□□□□ -1.57
BRCA1-229ENST00000621897 EIF4A1P60842 406 aaKnown RBP5.25□□□□□ -1.57
BRCA1-229ENST00000621897 GPC5P78333 572 aa5.25□□□□□ -1.57
BRCA1-229ENST00000621897 DAG1Q14118 895 aa5.25□□□□□ -1.57
BRCA1-229ENST00000621897 KCNB1Q14721 858 aa5.25□□□□□ -1.57
BRCA1-229ENST00000621897 MFSD13AQ14CX5 517 aa5.25□□□□□ -1.57
BRCA1-229ENST00000621897 RABEP1Q15276 862 aa5.25□□□□□ -1.57
BRCA1-229ENST00000621897 KLHDC7AQ5VTJ3 777 aa5.25□□□□□ -1.57
BRCA1-229ENST00000621897 GRHL2Q6ISB3 625 aa5.25□□□□□ -1.57
BRCA1-229ENST00000621897 RNF44Q7L0R7 432 aa5.25□□□□□ -1.57
BRCA1-229ENST00000621897 C12orf76Q8N812 135 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-229ENST00000621897 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-229ENST00000621897 OSR1Q8TAX0 266 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-229ENST00000621897 ZDHHC12Q96GR4 267 aa5.25□□□□□ -1.57
BRCA1-229ENST00000621897 PRR11Q96HE9 360 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-229ENST00000621897 HS6ST2Q96MM7 605 aa5.25□□□□□ -1.57
BRCA1-229ENST00000621897 UNKQ9C0B0 810 aaKnown RBP5.25□□□□□ -1.57
BRCA1-229ENST00000621897 GAR1Q9NY12 217 aaKnown RBP5.25□□□□□ -1.57
BRCA1-229ENST00000621897 RHPN2P1A8MT19 583 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 CLIC1O00299 241 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 DSCR3O14972 297 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 IL18RAPO95256 599 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 CD19P15391 556 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 RPL17P18621 184 aaKnown RBP5.24□□□□□ -1.57
BRCA1-229ENST00000621897 ADRA1DP25100 572 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 HOXD9P28356 352 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-229ENST00000621897 MTAPQ13126 283 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 SLC14A1Q13336 389 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 ST3GAL2Q16842 350 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 TMTC4Q5T4D3 741 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 MZT2AQ6P582 158 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 RANBP10Q6VN20 620 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 LIX1LQ8IVB5 337 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 PNPLA1Q8N8W4 532 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 IGFBPL1Q8WX77 278 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 IQCDQ96DY2 449 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 FAM227BQ96M60 508 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 FCRL4Q96PJ5 515 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 SLC25A32Q9H2D1 315 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 USP29Q9HBJ7 922 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 PNPLA8Q9NP80 782 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 GJB4Q9NTQ9 266 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 TRNAU1APQ9NX07 287 aaKnown RBP5.24□□□□□ -1.57
BRCA1-229ENST00000621897 TUBA8Q9NY65 449 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-229ENST00000621897 COL15A1P39059 1388 aa5.24□□□□□ -1.57
BRCA1-229ENST00000621897 FYB1O15117 783 aa5.23□□□□□ -1.57
BRCA1-229ENST00000621897 KPNA5O15131 536 aa5.23□□□□□ -1.57
BRCA1-229ENST00000621897 SNX2O60749 519 aa5.23□□□□□ -1.57
BRCA1-229ENST00000621897 MBPP02686 304 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-229ENST00000621897 HMGB1P09429 215 aaKnown RBP5.23□□□□□ -1.57
BRCA1-229ENST00000621897 ZNF543Q08ER8 600 aa5.23□□□□□ -1.57
BRCA1-229ENST00000621897 CLCA4Q14CN2 919 aa5.23□□□□□ -1.57
BRCA1-229ENST00000621897 TRIP6Q15654 476 aaKnown RBP5.23□□□□□ -1.57
BRCA1-229ENST00000621897 C4orf46Q504U0 113 aa5.23□□□□□ -1.57
BRCA1-229ENST00000621897 SDR16C5Q8N3Y7 309 aa5.23□□□□□ -1.57
BRCA1-229ENST00000621897 FSTL5Q8N475 847 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-229ENST00000621897 ZNF366Q8N895 744 aa5.23□□□□□ -1.57
BRCA1-229ENST00000621897 PRSS3P2Q8NHM4 247 aa5.23□□□□□ -1.57
BRCA1-229ENST00000621897 TTC17Q96AE7 1141 aa5.23□□□□□ -1.57
BRCA1-229ENST00000621897 NAF1Q96HR8 494 aaKnown RBP5.23□□□□□ -1.57
BRCA1-229ENST00000621897 HEYLQ9NQ87 328 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-229ENST00000621897 VPS45Q9NRW7 570 aa5.23□□□□□ -1.57
BRCA1-229ENST00000621897 FAM50BQ9Y247 325 aa5.23□□□□□ -1.57
BRCA1-229ENST00000621897 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-229ENST00000621897 POM121BA6NF01 834 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms