RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 FBXO44Q9H4M3 255 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 CYP4F11Q9HBI6 524 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 TLR9Q9NR96 1032 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 KLHL11Q9NVR0 708 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 IL37Q9NZH6 218 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 GMIPQ9P107 970 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 STAP1Q9ULZ2 295 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 USP18Q9UMW8 372 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 NAALADL1Q9UQQ1 740 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.14□□□□□ -0.63
CPNE3-212ENST00000621783 GREB1Q4ZG55 1949 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 A0A1W2PQH9 124 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 FAM92AA1XBS5 289 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 C2orf71A6NGG8 1288 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 HIDE1A8MVS5 230 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 PGRMC1O00264 195 aaKnown RBP11.13□□□□□ -0.63
CPNE3-212ENST00000621783 PRRG1O14668 218 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 CAPN9O14815 690 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 FSCN2O14926 492 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 GRM6O15303 877 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 TRUB2O95900 331 aaKnown RBP11.13□□□□□ -0.63
CPNE3-212ENST00000621783 ADH1AP07327 375 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 PYGMP11217 842 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 NCAM1P13591 858 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 YWHAQP27348 245 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 PGFP49763 221 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 ATXN1P54253 815 aaKnown RBP11.13□□□□□ -0.63
CPNE3-212ENST00000621783 ERVK-21P61565 698 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 MTMR3Q13615 1198 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 SMTNL2Q2TAL5 461 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 AADACL2Q6P093 401 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 CYP4V2Q6ZWL3 525 aaPredicted RBP11.13□□□□□ -0.63
CPNE3-212ENST00000621783 BEND5Q7L4P6 421 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 ZNF572Q7Z3I7 529 aaPredicted RBP11.13□□□□□ -0.63
CPNE3-212ENST00000621783 BNIPLQ7Z465 357 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 SCD5Q86SK9 330 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 MNS1Q8NEH6 495 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 ACTRT1Q8TDG2 376 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 EDEM1Q92611 657 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 CENPIQ92674 756 aaPredicted RBP11.13□□□□□ -0.63
CPNE3-212ENST00000621783 NT5C3BQ969T7 300 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 CEP295NLQ96MC4 621 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 NCAPGQ9BPX3 1015 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 TTLL2Q9BWV7 592 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 EMILIN2Q9BXX0 1053 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 PBX4Q9BYU1 374 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 NKX2-4Q9H2Z4 354 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 ZWILCHQ9H900 591 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 NMUR1Q9HB89 426 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 COMMD8Q9NX08 183 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 DDX56Q9NY93 547 aaKnown RBP11.13□□□□□ -0.63
CPNE3-212ENST00000621783 CALCOCO1Q9P1Z2 691 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 RNF14Q9UBS8 474 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 PCSK1NQ9UHG2 260 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 FBXW11Q9UKB1 542 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 MAFFQ9ULX9 164 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 INSL5Q9Y5Q6 135 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 IRAK3Q9Y616 596 aa11.13□□□□□ -0.63
CPNE3-212ENST00000621783 ATG2AQ2TAZ0 1938 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.12□□□□□ -0.63
CPNE3-212ENST00000621783 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.12□□□□□ -0.63
CPNE3-212ENST00000621783 M0QYT0 321 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 TGM5O43548 720 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 PRPSAP2O60256 369 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 KRT7P08729 469 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 ELF1P32519 619 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 RDXP35241 583 aaKnown RBP11.12□□□□□ -0.63
CPNE3-212ENST00000621783 IRS1P35568 1242 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 PAFAH1B1P43034 410 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 C2orf54Q08AI8 447 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 TWF1Q12792 350 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 TAF10Q12962 218 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 GPM6BQ13491 265 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 RAB30Q15771 203 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 ATP13A4Q4VNC1 1196 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 ZFYVE27Q5T4F4 411 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 BTBD8Q5XKL5 378 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 TAC4Q86UU9 113 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 CCDC50Q8IVM0 306 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 TCEAL8Q8IYN2 117 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 ARHGAP18Q8N392 663 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 MRPL43Q8N983 215 aaKnown RBP11.12□□□□□ -0.63
CPNE3-212ENST00000621783 EXD1Q8NHP7 514 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 SLC7A14Q8TBB6 771 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 ADAM32Q8TC27 787 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 DQX1Q8TE96 717 aaKnown RBP11.12□□□□□ -0.63
CPNE3-212ENST00000621783 RBM41Q96IZ5 413 aaKnown RBP11.12□□□□□ -0.63
CPNE3-212ENST00000621783 FAM204AQ9H8W3 233 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 ABCC13Q9NSE7 274 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 OSER1Q9NX31 292 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 RRN3Q9NYV6 651 aa11.12□□□□□ -0.63
CPNE3-212ENST00000621783 TTC7AQ9ULT0 858 aaPredicted RBP11.12□□□□□ -0.63
CPNE3-212ENST00000621783 MAGED2Q9UNF1 606 aaPredicted RBP11.12□□□□□ -0.63
CPNE3-212ENST00000621783 SYNJ2BP-COX16A0A087WUM0 186 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 LRRD1A4D1F6 860 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 CTAGE15A4D2H0 777 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 PI4K2BG5E9Z4 385 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 H3BNC9 293 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 LPXNO60711 386 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 TADA3O75528 432 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms