RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 SH3RF2Q8TEC5 729 aa19.48■□□□□ 0.71
CIRBP-245ENST00000621399 DEPDC1BQ8WUY9 529 aa19.48■□□□□ 0.71
CIRBP-245ENST00000621399 SYN2Q92777 582 aaPredicted RBP19.48■□□□□ 0.71
CIRBP-245ENST00000621399 LRRC3BQ96PB8 259 aa19.48■□□□□ 0.71
CIRBP-245ENST00000621399 PCDHB18PQ96TA0 734 aa19.48■□□□□ 0.71
CIRBP-245ENST00000621399 TRMT61BQ9BVS5 477 aaKnown RBP19.48■□□□□ 0.71
CIRBP-245ENST00000621399 HAUS4Q9H6D7 363 aa19.48■□□□□ 0.71
CIRBP-245ENST00000621399 ABCC13Q9NSE7 274 aa19.48■□□□□ 0.71
CIRBP-245ENST00000621399 MUC3AQ02505 3323 aa19.48■□□□□ 0.71
CIRBP-245ENST00000621399 DCXO43602 365 aa19.47■□□□□ 0.71
CIRBP-245ENST00000621399 NARSO43776 548 aaKnown RBP19.47■□□□□ 0.71
CIRBP-245ENST00000621399 LTFP02788 710 aa19.47■□□□□ 0.71
CIRBP-245ENST00000621399 ERBB2P04626 1255 aa19.47■□□□□ 0.71
CIRBP-245ENST00000621399 SKILP12757 684 aa19.47■□□□□ 0.71
CIRBP-245ENST00000621399 TNFAIP3P21580 790 aa19.47■□□□□ 0.71
CIRBP-245ENST00000621399 PRKCIP41743 596 aa19.47■□□□□ 0.71
CIRBP-245ENST00000621399 OR6B2Q6IFH4 312 aa19.47■□□□□ 0.71
CIRBP-245ENST00000621399 KLHDC10Q6PID8 442 aa19.47■□□□□ 0.71
CIRBP-245ENST00000621399 HFE2Q6ZVN8 426 aa19.47■□□□□ 0.71
CIRBP-245ENST00000621399 TMC6Q7Z403 805 aa19.47■□□□□ 0.71
CIRBP-245ENST00000621399 ZNF276Q8N554 614 aa19.47■□□□□ 0.71
CIRBP-245ENST00000621399 RNF139Q8WU17 664 aa19.47■□□□□ 0.71
CIRBP-245ENST00000621399 EDEM1Q92611 657 aa19.47■□□□□ 0.71
CIRBP-245ENST00000621399 KHSRPQ92945 711 aaKnown RBP eCLIP19.47■□□□□ 0.71
CIRBP-245ENST00000621399 FAM149B1Q96BN6 582 aa19.47■□□□□ 0.71
CIRBP-245ENST00000621399 SMOC2Q9H3U7 446 aa19.47■□□□□ 0.71
CIRBP-245ENST00000621399 THG1LQ9NWX6 298 aaKnown RBP19.47■□□□□ 0.71
CIRBP-245ENST00000621399 DNMT3LQ9UJW3 386 aa19.47■□□□□ 0.71
CIRBP-245ENST00000621399 NCOR1O75376 2440 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 LEFTY2O00292 366 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 ZNF263O14978 683 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 MDM4O15151 490 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 SRFP11831 508 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 ALADP13716 330 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 GDI1P31150 447 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 GPC5P78333 572 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 EFEMP1Q12805 493 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 CLEC16AQ2KHT3 1053 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 FAM183BPQ6ZVS7 135 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 MIB1Q86YT6 1006 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 UBALD2Q8IYN6 164 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 SLC30A5Q8TAD4 765 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 C18orf8Q96DM3 657 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 MRFAP1L1Q96HT8 127 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 GKN1Q9NS71 199 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 OLA1Q9NTK5 396 aaKnown RBP19.46■□□□□ 0.71
CIRBP-245ENST00000621399 RASAL2Q9UJF2 1139 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 DUSP12Q9UNI6 340 aa19.46■□□□□ 0.71
CIRBP-245ENST00000621399 ZNF638Q14966 1978 aaKnown RBP19.45■□□□□ 0.7
CIRBP-245ENST00000621399 SERPING1P05155 500 aa19.45■□□□□ 0.7
CIRBP-245ENST00000621399 UNGP13051 313 aaPredicted RBP19.45■□□□□ 0.7
CIRBP-245ENST00000621399 NSFP46459 744 aaKnown RBP19.45■□□□□ 0.7
CIRBP-245ENST00000621399 YWHAZP63104 245 aaKnown RBP19.45■□□□□ 0.7
CIRBP-245ENST00000621399 ZXDAP98168 799 aa19.45■□□□□ 0.7
CIRBP-245ENST00000621399 ZXDBP98169 803 aa19.45■□□□□ 0.7
CIRBP-245ENST00000621399 FCHO2Q0JRZ9 810 aa19.45■□□□□ 0.7
CIRBP-245ENST00000621399 ZNF77Q15935 545 aa19.45■□□□□ 0.7
CIRBP-245ENST00000621399 EFHC1Q5JVL4 640 aa19.45■□□□□ 0.7
CIRBP-245ENST00000621399 CC2D1AQ6P1N0 951 aaPredicted RBP19.45■□□□□ 0.7
CIRBP-245ENST00000621399 TOGARAM2Q6ZUX3 1019 aa19.45■□□□□ 0.7
CIRBP-245ENST00000621399 ZNF571Q7Z3V5 609 aaPredicted RBP19.45■□□□□ 0.7
CIRBP-245ENST00000621399 DDX42Q86XP3 938 aaKnown RBP eCLIP19.45■□□□□ 0.7
CIRBP-245ENST00000621399 ZDHHC17Q8IUH5 632 aa19.45■□□□□ 0.7
CIRBP-245ENST00000621399 SYT11Q9BT88 431 aa19.45■□□□□ 0.7
CIRBP-245ENST00000621399 TRIM62Q9BVG3 475 aa19.45■□□□□ 0.7
CIRBP-245ENST00000621399 BRD9Q9H8M2 597 aa19.45■□□□□ 0.7
CIRBP-245ENST00000621399 CFAP97Q9P2B7 532 aa19.45■□□□□ 0.7
CIRBP-245ENST00000621399 STRIP2Q9ULQ0 834 aa19.45■□□□□ 0.7
CIRBP-245ENST00000621399 BZW2Q9Y6E2 419 aaKnown RBP19.45■□□□□ 0.7
CIRBP-245ENST00000621399 CAPN9O14815 690 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 NCAM1P13591 858 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 TCF3P15923 654 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 MMP8P22894 467 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 GABRB2P47870 512 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 SLC6A3Q01959 620 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 GOLGA8FQ08AF8 430 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 GOLGA8DPQ0D2H9 430 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 USP4Q13107 963 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 MTF1Q14872 753 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 TAF5Q15542 800 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 TSR1Q2NL82 804 aaKnown RBP19.44■□□□□ 0.7
CIRBP-245ENST00000621399 ARHGAP29Q52LW3 1261 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 C2CD6Q53TS8 623 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 TDRD12Q587J7 1177 aaKnown RBP19.44■□□□□ 0.7
CIRBP-245ENST00000621399 OLFML1Q6UWY5 402 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 MMS22LQ6ZRQ5 1243 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 OR8K1Q8NGG5 319 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 RIN3Q8TB24 985 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 EDAQ92838 391 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 ZFRQ96KR1 1074 aaKnown RBP19.44■□□□□ 0.7
CIRBP-245ENST00000621399 KLF16Q9BXK1 252 aaPredicted RBP19.44■□□□□ 0.7
CIRBP-245ENST00000621399 MARCH2Q9P0N8 246 aa19.44■□□□□ 0.7
CIRBP-245ENST00000621399 OBSL1O75147 1896 aa19.43■□□□□ 0.7
CIRBP-245ENST00000621399 CHADO15335 359 aa19.43■□□□□ 0.7
CIRBP-245ENST00000621399 GLI1P08151 1106 aa19.43■□□□□ 0.7
CIRBP-245ENST00000621399 IRF1P10914 325 aa19.43■□□□□ 0.7
CIRBP-245ENST00000621399 PFKPQ01813 784 aa19.43■□□□□ 0.7
CIRBP-245ENST00000621399 CENPCQ03188 943 aa19.43■□□□□ 0.7
CIRBP-245ENST00000621399 TBX2Q13207 712 aaPredicted RBP19.43■□□□□ 0.7
CIRBP-245ENST00000621399 HGSNATQ68CP4 663 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms