RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 OVOS1Q6IE37 1185 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 CCDC121Q6ZUS5 278 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 FUBP3Q96I24 572 aaKnown RBP eCLIP9.1□□□□□ -0.95
GTF2I-219ENST00000621040 SPATA17Q96L03 361 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 SELENOOQ9BVL4 669 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 RABEP2Q9H5N1 569 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 NHEJ1Q9H9Q4 299 aaPredicted RBP9.1□□□□□ -0.95
GTF2I-219ENST00000621040 IL21Q9HBE4 155 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 APOBEC3GQ9HC16 384 aaKnown RBP9.1□□□□□ -0.95
GTF2I-219ENST00000621040 CEP72Q9P209 647 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 AGAP1Q9UPQ3 857 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 CNTN6Q9UQ52 1028 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 SIK3Q9Y2K2 1263 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 NR2E1Q9Y466 385 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 NCANO14594 1321 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 CCDC195A0A1B0GUA6 201 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 FAM92AA1XBS5 289 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 CREB3O43889 395 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 E2F6O75461 281 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 TCF3P15923 654 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 IFT88Q13099 833 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 PDCLQ13371 301 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 LBRQ14739 615 aaKnown RBP9.1□□□□□ -0.95
GTF2I-219ENST00000621040 ASTE1Q2TB18 679 aaPredicted RBP9.1□□□□□ -0.95
GTF2I-219ENST00000621040 CTXN3Q4LDR2 81 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 SV2AQ7L0J3 742 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 TRIM59Q8IWR1 403 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 CSGALNACT2Q8N6G5 542 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 KIAA1958Q8N8K9 716 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 LEMD2Q8NC56 503 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 WHAMMQ8TF30 809 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 AENQ8WTP8 325 aaKnown RBP9.1□□□□□ -0.95
GTF2I-219ENST00000621040 HPDLQ96IR7 371 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 CCT8L2Q96SF2 557 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 CRTAC1Q9NQ79 661 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 PCMTD2Q9NV79 361 aa9.1□□□□□ -0.95
GTF2I-219ENST00000621040 NOP53Q9NZM5 478 aaKnown RBP9.1□□□□□ -0.95
GTF2I-219ENST00000621040 DMGDHQ9UI17 866 aaKnown RBP9.1□□□□□ -0.95
GTF2I-219ENST00000621040 F8VZ95 297 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 SMIM24O75264 130 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 RFPL2O75678 378 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 TNNC2P02585 160 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 C8AP07357 584 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 HMGA1P17096 107 aaKnown RBP9.09□□□□□ -0.95
GTF2I-219ENST00000621040 ALDH3A1P30838 453 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 LHX1P48742 406 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 FKBP3Q00688 224 aaKnown RBP9.09□□□□□ -0.95
GTF2I-219ENST00000621040 SPRED3Q2MJR0 410 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 RARS2Q5T160 578 aaKnown RBP9.09□□□□□ -0.95
GTF2I-219ENST00000621040 BMP8AQ7Z5Y6 402 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 NLRP14Q86W24 1093 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 PSMG2Q969U7 264 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 NECAB3Q96P71 396 aaPredicted RBP9.09□□□□□ -0.95
GTF2I-219ENST00000621040 TTLL2Q9BWV7 592 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 THAP9Q9H5L6 903 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 CSNK1G1Q9HCP0 422 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 UTP6Q9NYH9 597 aaKnown RBP9.09□□□□□ -0.95
GTF2I-219ENST00000621040 CDH9Q9ULB4 789 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 P4HA2O15460 535 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 C2orf54Q08AI8 447 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 HTR4Q13639 388 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 TTMPQ5BVD1 217 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 ELMSAN1Q6PJG2 1045 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 PAQR9Q6ZVX9 377 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 FAM186BQ8IYM0 893 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 ZNF687Q8N1G0 1237 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 CRYBG2Q8N1P7 616 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 C12orf76Q8N812 135 aaPredicted RBP9.09□□□□□ -0.95
GTF2I-219ENST00000621040 C1orf131Q8NDD1 294 aaKnown RBP9.09□□□□□ -0.95
GTF2I-219ENST00000621040 RUBCNQ92622 972 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 SEMA4DQ92854 862 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 TBC1D31Q96DN5 1066 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 CAPZA3Q96KX2 299 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 TUBGCP2Q9BSJ2 902 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 MMRN2Q9H8L6 949 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 YIPF1Q9Y548 306 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 SHISA7A6NL88 538 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 C2CD2LO14523 706 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 EXOC3O60645 756 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 GPR37L1O60883 481 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 LCA5LO95447 670 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 MYL6P60660 151 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 TFAMQ00059 246 aaKnown RBP9.09□□□□□ -0.95
GTF2I-219ENST00000621040 APBA1Q02410 837 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 PLD1Q13393 1074 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 CMPK2Q5EBM0 449 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 CCNI2Q6ZMN8 369 aaPredicted RBP9.09□□□□□ -0.95
GTF2I-219ENST00000621040 ZNF572Q7Z3I7 529 aaPredicted RBP9.09□□□□□ -0.95
GTF2I-219ENST00000621040 FAM114A1Q8IWE2 563 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 SPPL2BQ8TCT7 592 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 NXPE3Q969Y0 559 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 MYADMQ96S97 322 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 MRPL45Q9BRJ2 306 aaKnown RBP9.09□□□□□ -0.95
GTF2I-219ENST00000621040 PLXND1Q9Y4D7 1925 aa9.09□□□□□ -0.95
GTF2I-219ENST00000621040 ARNTLO00327 626 aa9.08□□□□□ -0.96
GTF2I-219ENST00000621040 TMEM191BP0C7N4 346 aa9.08□□□□□ -0.96
GTF2I-219ENST00000621040 CCR2P41597 374 aa9.08□□□□□ -0.96
GTF2I-219ENST00000621040 DNA2P51530 1060 aa9.08□□□□□ -0.96
GTF2I-219ENST00000621040 ADAM9Q13443 819 aa9.08□□□□□ -0.96
GTF2I-219ENST00000621040 SNX30Q5VWJ9 437 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms