RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 GALNT8Q9NY28 637 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 KLRG2A4D1S0 409 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-216ENST00000620854 SH3BP5O60239 455 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 NPM3O75607 178 aaKnown RBP7.22□□□□□ -1.25
NEDD9-216ENST00000620854 ZBED1O96006 694 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 ICAM1P05362 532 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 EIF3EP60228 445 aaKnown RBP7.22□□□□□ -1.25
NEDD9-216ENST00000620854 RPS6P62753 249 aaKnown RBP7.22□□□□□ -1.25
NEDD9-216ENST00000620854 PRKD1Q15139 912 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-216ENST00000620854 KLHL38Q2WGJ6 581 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 SFT2D3Q587I9 215 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 MAP3K21Q5TCX8 1036 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 VWA5B1Q5TIE3 1220 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 GPAT2Q6NUI2 795 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 SWSAP1Q6NVH7 229 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 ANO5Q75V66 913 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 TDRPQ86YL5 185 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 ST13P4Q8IZP2 240 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-216ENST00000620854 MCPH1Q8NEM0 835 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 FAM81AQ8TBF8 368 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 FAF2Q96CS3 445 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 MPP4Q96JB8 637 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 PARK7Q99497 189 aaKnown RBP7.22□□□□□ -1.25
NEDD9-216ENST00000620854 CENPKQ9BS16 269 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 TUBB6Q9BUF5 446 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 MSTO1Q9BUK6 570 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 ACSS3Q9H6R3 686 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 VCX3AQ9NNX9 186 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 AVENQ9NQS1 362 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-216ENST00000620854 FAF1Q9UNN5 650 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-216ENST00000620854 NR2E3Q9Y5X4 410 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 ASTN2O75129 1339 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-216ENST00000620854 hCG_1818297A0A087WSY0 165 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 ASB14A6NK59 587 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 YDJCA8MPS7 323 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 ADM5C9JUS6 153 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 SLC25A27O95847 323 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 CST3P01034 146 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-216ENST00000620854 ZNF252P-AS1Q0IIN9 211 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 CUL2Q13617 745 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 OASLQ15646 514 aaKnown RBP7.22□□□□□ -1.25
NEDD9-216ENST00000620854 NETO2Q8NC67 525 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 IFT43Q96FT9 208 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 FAM167AQ96KS9 214 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 TARS2Q9BW92 718 aaKnown RBP7.22□□□□□ -1.25
NEDD9-216ENST00000620854 NACA2Q9H009 215 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 MAN1C1Q9NR34 630 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 LMCD1Q9NZU5 365 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 SLC17A6Q9P2U8 582 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 APPL1Q9UKG1 709 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 PCDHA10Q9Y5I2 948 aa7.22□□□□□ -1.25
NEDD9-216ENST00000620854 ABLIM1O14639 778 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 TM9SF1O15321 606 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 SLC4A1P02730 911 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 IL1R2P27930 398 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 GCNT1Q02742 428 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 MYBPC2Q14324 1141 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 HIC1Q14526 733 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 HSF5Q4G112 596 aaPredicted RBP7.21□□□□□ -1.25
NEDD9-216ENST00000620854 CES4AQ5XG92 561 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 HPS6Q86YV9 775 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 CRLF3Q8IUI8 442 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 DRAXINQ8NBI3 349 aaPredicted RBP7.21□□□□□ -1.25
NEDD9-216ENST00000620854 CEP70Q8NHQ1 597 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 GTF3C2Q8WUA4 911 aaPredicted RBP7.21□□□□□ -1.25
NEDD9-216ENST00000620854 UPF1Q92900 1129 aaKnown RBP eCLIP7.21□□□□□ -1.25
NEDD9-216ENST00000620854 ATXN7L3BQ96GX2 97 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 TRAPPC9Q96Q05 1148 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 PCDH9Q9HC56 1237 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 GBA2Q9HCG7 927 aaPredicted RBP7.21□□□□□ -1.25
NEDD9-216ENST00000620854 DMAP1Q9NPF5 467 aaPredicted RBP7.21□□□□□ -1.25
NEDD9-216ENST00000620854 IL1RAPL1Q9NZN1 696 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 SHOC2Q9UQ13 582 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 COQ4Q9Y3A0 265 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 SCINQ9Y6U3 715 aa7.21□□□□□ -1.25
NEDD9-216ENST00000620854 ATAD5Q96QE3 1844 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 CAPN8A6NHC0 703 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 TNPO2O14787 897 aaKnown RBP7.21□□□□□ -1.26
NEDD9-216ENST00000620854 DHX15O43143 795 aaKnown RBP7.21□□□□□ -1.26
NEDD9-216ENST00000620854 PRPSAP2O60256 369 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 CSDE1O75534 798 aaKnown RBP7.21□□□□□ -1.26
NEDD9-216ENST00000620854 CCNE2O96020 404 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 CDKN2BP42772 138 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 USP46P62068 366 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 RPL10AP62906 217 aaKnown RBP7.21□□□□□ -1.26
NEDD9-216ENST00000620854 CRADDP78560 199 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 ACAP1Q15027 740 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 SLC5A9Q2M3M2 681 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.21□□□□□ -1.26
NEDD9-216ENST00000620854 UNC5BQ8IZJ1 945 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 GALNT4Q8N4A0 578 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 CHST13Q8NET6 341 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 JOSD2Q8TAC2 188 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 MOCOSQ96EN8 888 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 RIT2Q99578 217 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 TIPINQ9BVW5 301 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 ANLNQ9NQW6 1124 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 ARHGEF4Q9NR80 690 aa7.21□□□□□ -1.26
NEDD9-216ENST00000620854 RBAKQ9NYW8 714 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-216ENST00000620854 AGO2Q9UKV8 859 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms