RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 NAALADL1Q9UQQ1 740 aa14.3□□□□□ -0.12
NEK3-210ENST00000620675 C2CD4DB7Z1M9 353 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 COCHO43405 550 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 TLR5O60602 858 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 RTN2O75298 545 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 LTFP02788 710 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 RARGP13631 454 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 TFE3P19532 575 aaPredicted RBP14.29□□□□□ -0.12
NEK3-210ENST00000620675 GBP2P32456 591 aaPredicted RBP14.29□□□□□ -0.12
NEK3-210ENST00000620675 SLC6A3Q01959 620 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 FAM102AQ5T9C2 384 aaPredicted RBP14.29□□□□□ -0.12
NEK3-210ENST00000620675 SNX30Q5VWJ9 437 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 JOSD2Q8TAC2 188 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 ADAM32Q8TC27 787 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 MRPS31Q92665 395 aaKnown RBP14.29□□□□□ -0.12
NEK3-210ENST00000620675 WBP2Q969T9 261 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 RSPRY1Q96DX4 576 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 RPGRIP1Q96KN7 1286 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 TRIM7Q9C029 511 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 THAP2Q9H0W7 228 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 REXO2Q9Y3B8 237 aaKnown RBP14.29□□□□□ -0.12
NEK3-210ENST00000620675 A0A0U1RQJ8 604 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 ZNF197O14709 1029 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 SCAMP3O14828 347 aaKnown RBP14.29□□□□□ -0.12
NEK3-210ENST00000620675 FBXO21O94952 628 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 FLT3P36888 993 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 GALCP54803 685 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 RPL7AP62424 266 aaKnown RBP14.29□□□□□ -0.12
NEK3-210ENST00000620675 C1QBPQ07021 282 aaKnown RBP14.29□□□□□ -0.12
NEK3-210ENST00000620675 RAB6CQ53S08 254 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 VPS36Q86VN1 386 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 LRRC8AQ8IWT6 810 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 SCML4Q8N228 414 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 LEMD2Q8NC56 503 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 ATRIPQ8WXE1 791 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 OVCA2Q8WZ82 227 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 NECTIN4Q96NY8 510 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 LRRC3BQ96PB8 259 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 GCNAQ96QF7 691 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 RAB6CQ9H0N0 254 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 METTL5Q9NRN9 209 aaKnown RBP14.29□□□□□ -0.12
NEK3-210ENST00000620675 SMPD4Q9NXE4 827 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 CALCOCO1Q9P1Z2 691 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 SFMBT1Q9UHJ3 866 aa14.29□□□□□ -0.12
NEK3-210ENST00000620675 VIPR2P41587 438 aa14.28□□□□□ -0.12
NEK3-210ENST00000620675 GSDMDP57764 484 aa14.28□□□□□ -0.12
NEK3-210ENST00000620675 CCZ1BP86790 482 aa14.28□□□□□ -0.12
NEK3-210ENST00000620675 CCZ1P86791 482 aaPredicted RBP14.28□□□□□ -0.12
NEK3-210ENST00000620675 FAM78AQ5JUQ0 283 aa14.28□□□□□ -0.12
NEK3-210ENST00000620675 DEFB106AQ8N104 65 aa14.28□□□□□ -0.12
NEK3-210ENST00000620675 ACRBPQ8NEB7 543 aa14.28□□□□□ -0.12
NEK3-210ENST00000620675 TTC16Q8NEE8 873 aa14.28□□□□□ -0.12
NEK3-210ENST00000620675 PDZD8Q8NEN9 1154 aa14.28□□□□□ -0.12
NEK3-210ENST00000620675 ZSCAN18Q8TBC5 510 aaPredicted RBP14.28□□□□□ -0.12
NEK3-210ENST00000620675 IRGQQ8WZA9 623 aa14.28□□□□□ -0.12
NEK3-210ENST00000620675 DESI2Q9BSY9 194 aa14.28□□□□□ -0.12
NEK3-210ENST00000620675 RPP25Q9BUL9 199 aaKnown RBP14.28□□□□□ -0.12
NEK3-210ENST00000620675 TASP1Q9H6P5 420 aa14.28□□□□□ -0.12
NEK3-210ENST00000620675 GKN1Q9NS71 199 aa14.28□□□□□ -0.12
NEK3-210ENST00000620675 EHD2Q9NZN4 543 aa14.28□□□□□ -0.12
NEK3-210ENST00000620675 MYO1AQ9UBC5 1043 aa14.28□□□□□ -0.12
NEK3-210ENST00000620675 TMEM59LQ9UK28 342 aa14.28□□□□□ -0.12
NEK3-210ENST00000620675 CDH7Q9ULB5 785 aa14.28□□□□□ -0.12
NEK3-210ENST00000620675 F5P12259 2224 aa14.28□□□□□ -0.12
NEK3-210ENST00000620675 MSI1O43347 362 aaKnown RBP14.27□□□□□ -0.12
NEK3-210ENST00000620675 LAMP2P13473 410 aa14.27□□□□□ -0.12
NEK3-210ENST00000620675 NCAM1P13591 858 aa14.27□□□□□ -0.12
NEK3-210ENST00000620675 HDCP19113 662 aa14.27□□□□□ -0.12
NEK3-210ENST00000620675 YWHAZP63104 245 aaKnown RBP14.27□□□□□ -0.12
NEK3-210ENST00000620675 EFEMP1Q12805 493 aa14.27□□□□□ -0.12
NEK3-210ENST00000620675 ZNF268Q14587 947 aaPredicted RBP14.27□□□□□ -0.12
NEK3-210ENST00000620675 HECTD3Q5T447 861 aa14.27□□□□□ -0.12
NEK3-210ENST00000620675 OTUD1Q5VV17 481 aaPredicted RBP14.27□□□□□ -0.12
NEK3-210ENST00000620675 BTBD8Q5XKL5 378 aa14.27□□□□□ -0.12
NEK3-210ENST00000620675 SLC26A9Q7LBE3 791 aa14.27□□□□□ -0.12
NEK3-210ENST00000620675 TMTC1Q8IUR5 882 aa14.27□□□□□ -0.12
NEK3-210ENST00000620675 ARID3BQ8IVW6 561 aaPredicted RBP14.27□□□□□ -0.12
NEK3-210ENST00000620675 CMTM8Q8IZV2 173 aa14.27□□□□□ -0.12
NEK3-210ENST00000620675 RSAD2Q8WXG1 361 aa14.27□□□□□ -0.12
NEK3-210ENST00000620675 FGF14Q92915 247 aa14.27□□□□□ -0.12
NEK3-210ENST00000620675 ZNF653Q96CK0 615 aa14.27□□□□□ -0.12
NEK3-210ENST00000620675 ZFRQ96KR1 1074 aaKnown RBP14.27□□□□□ -0.12
NEK3-210ENST00000620675 PHF7Q9BWX1 381 aaPredicted RBP14.27□□□□□ -0.12
NEK3-210ENST00000620675 KCNF1Q9H3M0 494 aa14.27□□□□□ -0.12
NEK3-210ENST00000620675 EPN1Q9Y6I3 576 aaPredicted RBP14.27□□□□□ -0.12
NEK3-210ENST00000620675 RCCD1A6NED2 376 aa14.27□□□□□ -0.13
NEK3-210ENST00000620675 NDUFA10O95299 355 aa14.27□□□□□ -0.13
NEK3-210ENST00000620675 OLFM2O95897 454 aa14.27□□□□□ -0.13
NEK3-210ENST00000620675 CALB1P05937 261 aa14.27□□□□□ -0.13
NEK3-210ENST00000620675 CKMP06732 381 aa14.27□□□□□ -0.13
NEK3-210ENST00000620675 FCARP24071 287 aa14.27□□□□□ -0.13
NEK3-210ENST00000620675 RFC1P35251 1148 aaPredicted RBP14.27□□□□□ -0.13
NEK3-210ENST00000620675 DCAF6Q58WW2 860 aa14.27□□□□□ -0.13
NEK3-210ENST00000620675 C10orf120Q5SQS8 335 aa14.27□□□□□ -0.13
NEK3-210ENST00000620675 PPP1R15BQ5SWA1 713 aa14.27□□□□□ -0.13
NEK3-210ENST00000620675 PARM1Q6UWI2 310 aa14.27□□□□□ -0.13
NEK3-210ENST00000620675 TOGARAM2Q6ZUX3 1019 aa14.27□□□□□ -0.13
NEK3-210ENST00000620675 MIB1Q86YT6 1006 aa14.27□□□□□ -0.13
NEK3-210ENST00000620675 ADAMTS19Q8TE59 1207 aa14.27□□□□□ -0.13
NEK3-210ENST00000620675 USP13Q92995 863 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms