RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	ATF7IP2	Q5U623	682 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	XYLT1	Q86Y38	959 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	CCDC110	Q8TBZ0	833 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	SKA1	Q96BD8	255 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	PCYT2	Q99447	389 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	NMUR2	Q9GZQ4	415 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	VPS11	Q9H270	941 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	UGT1A7	Q9HAW7	530 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	UGT1A10	Q9HAW8	530 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	UGT1A8	Q9HAW9	530 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644		B2RBV5	119 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	FCHO1	O14526	889 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	MICAL2	O94851	1124 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	BAG2	O95816	211 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	NFIC	P08651	508 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	PGM1	P36871	562 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	ALDH18A1	P54886	795 aa	Known RBP	15.03	■□□□□ -0
SMTN-223	ENST00000619644	CDHR3	Q6ZTQ4	885 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	MTMR14	Q8NCE2	650 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	ALKBH8	Q96BT7	664 aa	Known RBP	15.03	■□□□□ -0
SMTN-223	ENST00000619644	DDX43	Q9NXZ2	648 aa	Known RBP	15.03	■□□□□ -0
SMTN-223	ENST00000619644	ANGPTL2	Q9UKU9	493 aa		15.03	■□□□□ -0
SMTN-223	ENST00000619644	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	15.03	■□□□□ -0
SMTN-223	ENST00000619644	PIGR	P01833	764 aa		15.02	■□□□□ -0
SMTN-223	ENST00000619644	ETS2	P15036	469 aa		15.02	■□□□□ -0
SMTN-223	ENST00000619644	CDK16	Q00536	496 aa		15.02	■□□□□ -0
SMTN-223	ENST00000619644	USP4	Q13107	963 aa		15.02	■□□□□ -0
SMTN-223	ENST00000619644	RASA2	Q15283	850 aa		15.02	■□□□□ -0
SMTN-223	ENST00000619644	CHI3L2	Q15782	390 aa		15.02	■□□□□ -0
SMTN-223	ENST00000619644	ANGEL2	Q5VTE6	544 aa	Known RBP	15.02	■□□□□ -0
SMTN-223	ENST00000619644	POLN	Q7Z5Q5	900 aa		15.02	■□□□□ -0
SMTN-223	ENST00000619644	ZNF276	Q8N554	614 aa		15.02	■□□□□ -0
SMTN-223	ENST00000619644	APOPT1	Q96IL0	206 aa		15.02	■□□□□ -0
SMTN-223	ENST00000619644	PIWIL1	Q96J94	861 aa	Known RBP	15.02	■□□□□ -0
SMTN-223	ENST00000619644	TMEM134	Q9H6X4	195 aa		15.02	■□□□□ -0
SMTN-223	ENST00000619644	PPCS	Q9HAB8	311 aa		15.02	■□□□□ -0
SMTN-223	ENST00000619644	ASNSD1	Q9NWL6	643 aa		15.02	■□□□□ -0
SMTN-223	ENST00000619644	GINS2	Q9Y248	185 aa		15.02	■□□□□ -0
SMTN-223	ENST00000619644	NR2E3	Q9Y5X4	410 aa		15.02	■□□□□ -0
SMTN-223	ENST00000619644	E2F8	A0AVK6	867 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	CXorf49	A8MYA2	514 aa	Predicted RBP	15.02	□□□□□ -0.01
SMTN-223	ENST00000619644		E5RJQ4	531 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	TOP3B	O95985	862 aa	Known RBP	15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	RBL1	P28749	1068 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	EFNA5	P52803	228 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	AP3M2	P53677	418 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	DSG1	Q02413	1049 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	ZPBP2	Q6X784	338 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	NETO2	Q8NC67	525 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	REPS2	Q8NFH8	660 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	RXFP2	Q8WXD0	754 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	NCSTN	Q92542	709 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	MIS12	Q9H081	205 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	SH3BP1	Q9Y3L3	701 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	SPDYE16	A6NNV3	312 aa	Predicted RBP	15.02	□□□□□ -0.01
SMTN-223	ENST00000619644		A8MXQ7	604 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	TRUB2	O95900	331 aa	Known RBP	15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	HOXC6	P09630	235 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	RARB	P10826	455 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	BCAR1	P56945	870 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	MCCD1	P59942	119 aa	Predicted RBP	15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	PTPN11	Q06124	597 aa	Predicted RBP	15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	LIN52	Q52LA3	116 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	DLK2	Q6UY11	383 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	OXNAD1	Q96HP4	312 aa	Predicted RBP	15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	CLPTM1L	Q96KA5	538 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	PEBP4	Q96S96	227 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	SDCBP2	Q9H190	292 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	RSAD1	Q9HA92	442 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	HOXC10	Q9NYD6	342 aa		15.02	□□□□□ -0.01
SMTN-223	ENST00000619644	BRWD3	Q6RI45	1802 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	PDLIM1	O00151	329 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	KRT37	O76014	449 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	FARP2	O94887	1054 aa	Predicted RBP	15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	PGK2	P07205	417 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	HSDL1	Q3SXM5	330 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	NUDCD3	Q8IVD9	361 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	SLC25A41	Q8N5S1	370 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	C12orf29	Q8N999	325 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	SEPT1	Q8WYJ6	367 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	XYLT2	Q9H1B5	865 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	KCNK13	Q9HB14	408 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	RNF19A	Q9NV58	838 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	CPSF3	Q9UKF6	684 aa	Known RBP	15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	MTO1	Q9Y2Z2	717 aa	Known RBP	15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	DNAJC6	O75061	913 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	HMGCR	P04035	888 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	ANPEP	P15144	967 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	ENPEP	Q07075	957 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	NIPA2	Q8N8Q9	360 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	TTC1	Q99614	292 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	CENPK	Q9BS16	269 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	SHCBP1L	Q9BZQ2	653 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	PCDHGC3	Q9UN70	934 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	SLC4A7	Q9Y6M7	1214 aa		15.01	□□□□□ -0.01
SMTN-223	ENST00000619644	CDK7	P50613	346 aa		15	□□□□□ -0.01
SMTN-223	ENST00000619644	NDUFAF2	Q8N183	169 aa		15	□□□□□ -0.01
SMTN-223	ENST00000619644	ARHGAP24	Q8N264	748 aa		15	□□□□□ -0.01
SMTN-223	ENST00000619644	UBR7	Q8N806	425 aa		15	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms