RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 LBPP18428 481 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 HOXC8P31273 242 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 MRPS22P82650 360 aaKnown RBP15.45■□□□□ 0.06
COL5A1-208ENST00000618395 CHRNA2Q15822 529 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 DHDDSQ86SQ9 333 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 MIER2Q8N344 545 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 GALNT15Q8N3T1 639 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 LRMDAQ9H2I8 198 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 E2F8A0AVK6 867 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 PRLRP16471 622 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 BNIP1Q12981 228 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 DENND1BQ6P3S1 775 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 TMC4Q7Z404 712 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 MCFD2Q8NI22 146 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 NMRK1Q9NWW6 199 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 CLCA2Q9UQC9 943 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 GJA3Q9Y6H8 435 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 FAM240BA0A1B0GVZ2 78 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 AGKQ53H12 422 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 FAM228AQ86W67 206 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 TFCP2L1Q9NZI6 479 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 BCLAF3A2AJT9 711 aaKnown RBP15.45■□□□□ 0.06
COL5A1-208ENST00000618395 SH3D21A4FU49 640 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 F8A1P23610 371 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 NPEPPSP55786 919 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 MAZP56270 477 aaKnown RBP15.45■□□□□ 0.06
COL5A1-208ENST00000618395 RASAL3Q86YV0 1011 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 BHLHE22Q8NFJ8 381 aaPredicted RBP15.45■□□□□ 0.06
COL5A1-208ENST00000618395 KIAA1683Q9H0B3 1180 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 C14orf93Q9H972 538 aaKnown RBP15.45■□□□□ 0.06
COL5A1-208ENST00000618395 DFFAO00273 331 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 WFS1O76024 890 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 UNC5CO95185 931 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 NAMPTP43490 491 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 PTK6Q13882 451 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 DDX50Q9BQ39 737 aaKnown RBP15.45■□□□□ 0.06
COL5A1-208ENST00000618395 CDH9Q9ULB4 789 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 TOPBP1Q92547 1522 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 A0A1W2PQJ5 194 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 DPPA5A6NC42 116 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 SERPINA1P01009 418 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 PTPN7P35236 360 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 COILP38432 576 aaPredicted RBP15.45■□□□□ 0.06
COL5A1-208ENST00000618395 MPP3Q13368 585 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 TMEM168Q9H0V1 697 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 SLC6A15Q9H2J7 730 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 SPASTQ9UBP0 616 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 EIF4G3O43432 1585 aaKnown RBP15.44■□□□□ 0.06
COL5A1-208ENST00000618395 DBTP11182 482 aaKnown RBP15.44■□□□□ 0.06
COL5A1-208ENST00000618395 TCIRG1Q13488 830 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 ERMARDQ5T6L9 678 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 ANKS1AQ92625 1134 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 RNF145Q96MT1 663 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 GPATCH1Q9BRR8 931 aaKnown RBP15.44■□□□□ 0.06
COL5A1-208ENST00000618395 MKNK1Q9BUB5 465 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 SEMA6AQ9H2E6 1030 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 DNAJC16Q9Y2G8 782 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 PLXNC1O60486 1568 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 POTEMA6NI47 508 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 ANPEPP15144 967 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 USP4Q13107 963 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 SGO1Q5FBB7 561 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 RNF220Q5VTB9 566 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 POTEHQ6S545 545 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 POTEGQ6S5H5 508 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 PACS1Q6VY07 963 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 SRPK1Q96SB4 655 aaKnown RBP15.44■□□□□ 0.06
COL5A1-208ENST00000618395 THAP1Q9NVV9 213 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 CD109Q6YHK3 1445 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 GSAPA4D1B5 854 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 TRIM64A6NGJ6 449 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 TRIM64BA6NI03 449 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 INO80DQ53TQ3 878 aaPredicted RBP15.44■□□□□ 0.06
COL5A1-208ENST00000618395 SLC13A5Q86YT5 568 aaPredicted RBP15.44■□□□□ 0.06
COL5A1-208ENST00000618395 TBC1D24Q9ULP9 559 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 SH2B2O14492 632 aaPredicted RBP15.44■□□□□ 0.06
COL5A1-208ENST00000618395 FGFR2P21802 821 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 PYHIN1Q6K0P9 492 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 CAB39LQ9H9S4 337 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 SLC25A13Q9UJS0 675 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 RPL26L1Q9UNX3 145 aaKnown RBP15.44■□□□□ 0.06
COL5A1-208ENST00000618395 TRPM2O94759 1503 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 KDM4BO94953 1096 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 FAUP35544 74 aaKnown RBP15.44■□□□□ 0.06
COL5A1-208ENST00000618395 HSD17B4P51659 736 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 COASYQ13057 564 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 ZNF394Q53GI3 561 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 TRAPPC3LQ5T215 181 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 PHC2Q8IXK0 858 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 EFHBQ8N7U6 833 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 PRAG1Q86YV5 1406 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 SRGNP10124 158 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 ACADLP28330 430 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 SLC9A6Q92581 669 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 AIFM2Q9BRQ8 373 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 PTTG2Q9NZH5 202 aa15.44■□□□□ 0.06
COL5A1-208ENST00000618395 THRBP10828 461 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 GUF1Q8N442 669 aaKnown RBP15.43■□□□□ 0.06
COL5A1-208ENST00000618395 ZSCAN18Q8TBC5 510 aaPredicted RBP15.43■□□□□ 0.06
COL5A1-208ENST00000618395 RIBC2Q9H4K1 309 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms