RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 F8VZ95 297 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 PIK3CDO00329 1044 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 SLC37A4O43826 429 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 HOXB8P17481 243 aaPredicted RBP17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 TAF2Q6P1X5 1199 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 ATXN2LQ8WWM7 1075 aaKnown RBP17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 RPRD1AQ96P16 312 aaPredicted RBP17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 TMEM106CQ9BVX2 250 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 SLC25A13Q9UJS0 675 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 ANKRD6Q9Y2G4 727 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 AP3M1Q9Y2T2 418 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 DYRK1BQ9Y463 629 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 SNUPNO95149 360 aaKnown RBP17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 PAX7P23759 505 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 SOX11P35716 441 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 PTENP60484 403 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 IZUMO2Q6UXV1 221 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 OSBPL10Q9BXB5 764 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 PRKD2Q9BZL6 878 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 C1orf167Q5SNV9 1468 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 ATP9AO75110 1047 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 SASH3O75995 380 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 TPBGLP0DKB5 382 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 CPA3P15088 417 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 SREBF2Q12772 1141 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 PCNX4Q63HM2 1172 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 CLPBQ9H078 707 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 SCUBE2Q9NQ36 999 aa17.93■□□□□ 0.46
HMGXB3-206ENST00000613459 VPS4BO75351 444 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 FAM58BPP0C7Q3 252 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 RENBPP51606 427 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 CYP24A1Q07973 514 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 ATG4CQ96DT6 458 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 ZFRQ96KR1 1074 aaKnown RBP17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 SH2D3AQ9BRG2 576 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 ADGRE3Q9BY15 652 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 MMADHCQ9H3L0 296 aaPredicted RBP17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 MROH8Q9H579 483 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 KPNA6O60684 536 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 NUP62P37198 522 aaPredicted RBP17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 RNF180Q86T96 592 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 MAGED4Q96JG8 741 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 TRAPPC9Q96Q05 1148 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 YIPF2Q9BWQ6 316 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 E9PCH4 1651 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 NKRFO15226 690 aaKnown RBP eCLIP17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 ANGPT1Q15389 498 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 FUT11Q495W5 492 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 FAM172AQ8WUF8 416 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 OSCP1Q8WVF1 389 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 KRT84Q9NSB2 600 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 ITGA11Q9UKX5 1188 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 DNAJC16Q9Y2G8 782 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 RGS5O15539 181 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 ZCCHC18P0CG32 403 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 TFE3P19532 575 aaPredicted RBP17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 RASA2Q15283 850 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 ATP6AP1LQ52LC2 224 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 GRTP1Q5TC63 336 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 ANGEL2Q5VTE6 544 aaKnown RBP17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 RINLQ6ZS11 566 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 BLOC1S5Q8TDH9 187 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 COMMD8Q9NX08 183 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 AP4E1Q9UPM8 1137 aa17.92■□□□□ 0.46
HMGXB3-206ENST00000613459 CNOT3O75175 753 aaKnown RBP17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 MED24O75448 989 aa17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 BST2Q10589 180 aaKnown RBP17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 PRKAA1Q13131 559 aa17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 PDPK2PQ6A1A2 396 aa17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 PRDM5Q9NQX1 630 aaPredicted RBP17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 USP18Q9UMW8 372 aa17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 SPATA31A6Q5VVP1 1343 aa17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 ASS1P00966 412 aaKnown RBP17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 CHI3L1P36222 383 aaPredicted RBP17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 MPP3Q13368 585 aa17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 CAMK2GQ13555 558 aaPredicted RBP17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 CYP4Z2PQ8N1L4 340 aa17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 NPTX2P47972 431 aa17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 HERC6Q8IVU3 1022 aa17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 MYO3AQ8NEV4 1616 aa17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 HERVK_113P62684 666 aa17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 ZNF284Q2VY69 593 aa17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 ADGRF2Q8IZF7 708 aa17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 EIF1ADQ8N9N8 165 aaKnown RBP17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 PPP1R10Q96QC0 940 aaKnown RBP17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 COPS7BQ9H9Q2 264 aaPredicted RBP17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 IARS2Q9NSE4 1012 aaKnown RBP17.91■□□□□ 0.46
HMGXB3-206ENST00000613459 DYRK3O43781 588 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 ZBTB7AO95365 584 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 AQP5P55064 265 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 PHKG1Q16816 387 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 PLEKHA7Q6IQ23 1121 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 FGD2Q7Z6J4 655 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 MTDHQ86UE4 582 aaKnown RBP17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 ASB2Q96Q27 587 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 DMAP1Q9NPF5 467 aaPredicted RBP17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 CNGB3Q9NQW8 809 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 CYP39A1Q9NYL5 469 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 MROH7Q68CQ1 1323 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 UBXN8O00124 270 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms