RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 C3orf62Q6ZUJ4 267 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 RSPH3Q86UC2 560 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 UNC45BQ8IWX7 931 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 PDIK1LQ8N165 341 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 SPOCK2Q92563 424 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 TWNKQ96RR1 684 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 PAFAH2Q99487 392 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 CFHR5Q9BXR6 569 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 EBF2Q9HAK2 575 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 ASNSD1Q9NWL6 643 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 HES2Q9Y543 173 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 TM9SF1O15321 606 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 DCTN3O75935 186 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 GPD2P43304 727 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 ZNF143P52747 638 aaPredicted RBP15.31■□□□□ 0.04
CDH1-213ENST00000612417 EIF3EP60228 445 aaKnown RBP15.31■□□□□ 0.04
CDH1-213ENST00000612417 MRPS6P82932 125 aaKnown RBP15.31■□□□□ 0.04
CDH1-213ENST00000612417 HHATQ5VTY9 493 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 RFX6Q8HWS3 928 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 ZNF784Q8NCA9 323 aaPredicted RBP15.31■□□□□ 0.04
CDH1-213ENST00000612417 FBXO36Q8NEA4 188 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 SLCO1B3Q9NPD5 702 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 CYLDQ9NQC7 956 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 DPP3Q9NY33 737 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 HMGXB4Q9UGU5 601 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 CHKBQ9Y259 395 aa15.31■□□□□ 0.04
CDH1-213ENST00000612417 RBP3P10745 1247 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 VDRP11473 427 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 P4HA1P13674 534 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 YY1P25490 414 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 ALDH3A1P30838 453 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 STIP1P31948 543 aaKnown RBP15.3■□□□□ 0.04
CDH1-213ENST00000612417 MSH2P43246 934 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 RNASELQ05823 741 aaKnown RBP15.3■□□□□ 0.04
CDH1-213ENST00000612417 INCA1Q0VD86 236 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 EFTUD2Q15029 972 aaKnown RBP eCLIP15.3■□□□□ 0.04
CDH1-213ENST00000612417 NOMO1Q15155 1222 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 LVRNQ6Q4G3 990 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 PCSK9Q8NBP7 692 aaKnown RBP15.3■□□□□ 0.04
CDH1-213ENST00000612417 ZNF398Q8TD17 642 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 DCAKDQ8WVC6 231 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 C10orf82Q8WW14 230 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 LRRC37BQ96QE4 947 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 MYLK2Q9H1R3 596 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 LRMDAQ9H2I8 198 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 NXF3Q9H4D5 531 aaKnown RBP15.3■□□□□ 0.04
CDH1-213ENST00000612417 C10orf88Q9H8K7 445 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 XPO7Q9UIA9 1087 aaKnown RBP15.3■□□□□ 0.04
CDH1-213ENST00000612417 C2CD2Q9Y426 696 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 CDY2AQ9Y6F7 541 aa15.3■□□□□ 0.04
CDH1-213ENST00000612417 TCRBV7S3A2A0A539 114 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 M0QYV0 167 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 CTSHP09668 335 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 ATP2A2P16615 1042 aaKnown RBP15.29■□□□□ 0.04
CDH1-213ENST00000612417 GBP2P32456 591 aaPredicted RBP15.29■□□□□ 0.04
CDH1-213ENST00000612417 NKX3-2P78367 333 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 DPYSL3Q14195 570 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 E2F5Q15329 346 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 PARP6Q2NL67 630 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 CYP4V2Q6ZWL3 525 aaPredicted RBP15.29■□□□□ 0.04
CDH1-213ENST00000612417 RNF180Q86T96 592 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 KIF2BQ8N4N8 673 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 ZNF276Q8N554 614 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 FAM71DQ8N9W8 422 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 KLHDC9Q8NEP7 349 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 SPATA18Q8TC71 538 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 ZNF75CPQ92670 426 aaPredicted RBP15.29■□□□□ 0.04
CDH1-213ENST00000612417 HPDLQ96IR7 371 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 CNPY3Q9BT09 278 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 PLEKHA5Q9HAU0 1116 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 PCSK1NQ9UHG2 260 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 STAU1O95793 577 aaKnown RBP15.29■□□□□ 0.04
CDH1-213ENST00000612417 FGFR1P11362 822 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 AKAP5P24588 427 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 RBP5P82980 135 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 TAF5Q15542 800 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 FAM102AQ5T9C2 384 aaPredicted RBP15.29■□□□□ 0.04
CDH1-213ENST00000612417 NT5DC4Q86YG4 428 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 PALM2Q8IXS6 379 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 TTC39CQ8N584 583 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 BANPQ8N9N5 519 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 AGAP11Q8TF27 550 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 HSPH1Q92598 858 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 ERP27Q96DN0 273 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 RAB3IPQ96QF0 476 aaPredicted RBP15.29■□□□□ 0.04
CDH1-213ENST00000612417 PEBP4Q96S96 227 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 MIS12Q9H081 205 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 ITGA11Q9UKX5 1188 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 TRPV2Q9Y5S1 764 aa15.29■□□□□ 0.04
CDH1-213ENST00000612417 C2CD4BA6NLJ0 364 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 SPAG6O75602 509 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 WFS1O76024 890 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 RECQL4O94761 1208 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 CCND1P24385 295 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 ROR1Q01973 937 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 ORC1Q13415 861 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 TFDP2Q14188 446 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 KCNJ11Q14654 390 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 TWF2Q6IBS0 349 aaKnown RBP15.28■□□□□ 0.04
CDH1-213ENST00000612417 OTOAQ7RTW8 1153 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms