RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 IL1R2P27930 398 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 GTF2F1P35269 517 aaKnown RBP eCLIP8.47□□□□□ -1.057e-26■■■□□ 18.2
TARDBP-213ENST00000611963 SCNN1AP37088 669 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 GRIK1P39086 918 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 ZNF143P52747 638 aaPredicted RBP8.47□□□□□ -1.05
TARDBP-213ENST00000611963 RWDD2BP57060 319 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 DAOAP59103 153 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 ATP11AP98196 1134 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 IFRD2Q12894 506 aaPredicted RBP8.47□□□□□ -1.05
TARDBP-213ENST00000611963 ELF2Q15723 593 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 CCDC85BQ15834 202 aaPredicted RBP8.47□□□□□ -1.05
TARDBP-213ENST00000611963 PSMD5Q16401 504 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 NFE2Q16621 373 aaPredicted RBP8.47□□□□□ -1.05
TARDBP-213ENST00000611963 ERCC6LQ2NKX8 1250 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 USP41Q3LFD5 358 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 CCDC14Q49A88 953 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 CFAP221Q4G0U5 840 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 ATP13A4Q4VNC1 1196 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 RAB41Q5JT25 222 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 SEL1L2Q5TEA6 688 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 RNF19BQ6ZMZ0 732 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 ANKS3Q6ZW76 656 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 RSRC2Q7L4I2 434 aaKnown RBP8.47□□□□□ -1.05
TARDBP-213ENST00000611963 BHLHA9Q7RTU4 235 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 ZNF572Q7Z3I7 529 aaPredicted RBP8.47□□□□□ -1.05
TARDBP-213ENST00000611963 ADAT2Q7Z6V5 191 aaKnown RBP8.47□□□□□ -1.05
TARDBP-213ENST00000611963 ZDHHC17Q8IUH5 632 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 RHOT1Q8IXI2 618 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 RNF168Q8IYW5 571 aaPredicted RBP8.47□□□□□ -1.05
TARDBP-213ENST00000611963 RASGEF1CQ8N431 466 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 SCAMP5Q8TAC9 235 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 PPM1EQ8WY54 764 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 GOLGA1Q92805 767 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 TMEM169Q96HH4 297 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 CFAP57Q96MR6 1250 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 PEBP4Q96S96 227 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 CNPY3Q9BT09 278 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 HERC2P3Q9BVR0 1158 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 COL25A1Q9BXS0 654 aaPredicted RBP8.47□□□□□ -1.05
TARDBP-213ENST00000611963 AP1M1Q9BXS5 423 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 CARD9Q9H257 536 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 ZWILCHQ9H900 591 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 CSNK1G1Q9HCP0 422 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 RBM12Q9NTZ6 932 aaKnown RBP8.47□□□□□ -1.05
TARDBP-213ENST00000611963 SPG21Q9NZD8 308 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 PCSK1NQ9UHG2 260 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 PCDHB5Q9Y5E4 795 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 MTCH2Q9Y6C9 303 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 NUP205Q92621 2012 aa8.47□□□□□ -1.05
TARDBP-213ENST00000611963 MTCL1Q9Y4B5 1905 aaKnown RBP8.46□□□□□ -1.05
TARDBP-213ENST00000611963 TRANK1O15050 2925 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 TCRBV7S2A1N4TA0A589 114 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 EFCAB8A8MWE9 144 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 DLL1O00548 723 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 HSF2BPO75031 334 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 DAB1O75553 588 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 FBXO21O94952 628 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 FGGP02679 453 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 SOD2P04179 222 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 KRT1P04264 644 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 LINC00271P0C7V0 271 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 MIPP30301 263 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 SDC4P31431 198 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 SLC5A3P53794 718 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 ATXN1P54253 815 aaKnown RBP8.46□□□□□ -1.06
TARDBP-213ENST00000611963 TERF1P54274 439 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 ERVK-21P61565 698 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 PITX1P78337 314 aaPredicted RBP8.46□□□□□ -1.06
TARDBP-213ENST00000611963 MRPS5P82675 430 aaKnown RBP8.46□□□□□ -1.06
TARDBP-213ENST00000611963 SLC25A11Q02978 314 aaKnown RBP8.46□□□□□ -1.06
TARDBP-213ENST00000611963 DDR2Q16832 855 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 SMTNL2Q2TAL5 461 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 EFHC1Q5JVL4 640 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 ZFYVE27Q5T4F4 411 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 KIAA1841Q6NSI8 718 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 ANKS1BQ7Z6G8 1248 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 DEFB106AQ8N104 65 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 FIBCD1Q8N539 461 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 SPATA4Q8NEY3 305 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 ACTRT1Q8TDG2 376 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 FAM172AQ8WUF8 416 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 AUTS2Q8WXX7 1259 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 PIK3R5Q8WYR1 880 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 TBCBQ99426 244 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 PHOX2BQ99453 314 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 HERPUD2Q9BSE4 406 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 UBXN6Q9BZV1 441 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 EPC1Q9H2F5 836 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 CRISPLD1Q9H336 500 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 NGRNQ9NPE2 291 aaKnown RBP8.46□□□□□ -1.06
TARDBP-213ENST00000611963 CNGB3Q9NQW8 809 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 CHST7Q9NS84 486 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 ASNSD1Q9NWL6 643 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 GPATCH2LQ9NWQ4 482 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.46□□□□□ -1.06
TARDBP-213ENST00000611963 MTRRQ9UBK8 725 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 RNF14Q9UBS8 474 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 LCMT1Q9UIC8 334 aa8.46□□□□□ -1.06
TARDBP-213ENST00000611963 TSR3Q9UJK0 312 aaKnown RBP8.46□□□□□ -1.06
TARDBP-213ENST00000611963 NR2E1Q9Y466 385 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms