RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 UNKQ9C0B0 810 aaKnown RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ANKRD2Q9GZV1 360 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 KIAA1683Q9H0B3 1180 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 RBM38Q9H0Z9 239 aaKnown RBP4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 C1orf21Q9H246 121 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 BLZF1Q9H2G9 400 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 SEMA4AQ9H3S1 761 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 MMRN2Q9H8L6 949 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 PLGRKTQ9HBL7 147 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 SH3GLB2Q9NR46 395 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 INIPQ9NRY2 104 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ETNK2Q9NVF9 386 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 GIN1Q9NXP7 522 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 EURLQ9NYK6 297 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 GRHL1Q9NZI5 618 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 WHRNQ9P202 907 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 AMACRQ9UHK6 382 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 HAO1Q9UJM8 370 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ACSL6Q9UKU0 697 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 AMFRQ9UKV5 643 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ASAP1Q9ULH1 1129 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 KCNJ14Q9UNX9 436 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 CHMP2BQ9UQN3 213 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 EFR3BQ9Y2G0 817 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 PMF1-BGLAPU3KQ54 211 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 TIAM2Q8IVF5 1701 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 CCDC88AQ3V6T2 1871 aa4.28□□□□□ -1.72
HMGB1P50-201ENST00000605814 ADGRA3Q8IWK6 1321 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 A0A087X0T9 212 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 A0A088AWK7 358 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 TLDC2A0PJX2 215 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 TRIM49BA6NDI0 452 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF701M0R085 212 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 CASQ2O14958 399 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 RNMTO43148 476 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 GPAA1O43292 621 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 BUD23O43709 281 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 CYTH3O43739 400 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 PARNO95453 639 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 TTC4O95801 387 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 FTCDO95954 541 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 CAPNS1P04632 268 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 TFAP2AP05549 437 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 GSNP06396 782 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 ABHD2P08910 425 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 H2AFZP0C0S5 128 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 MSL3P1P0C860 447 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 FAM228BP0C875 321 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 PCP11498 1178 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 ANPEPP15144 967 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF12P17014 697 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 CTNNA2P26232 953 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 CALML3P27482 149 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 EPHB2P29323 1055 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 HOXC9P31274 260 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 FOXN2P32314 431 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 STX2P32856 288 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 HALP42357 657 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 KLK7P49862 253 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 TIMM10P62072 90 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 PSMC1P62191 440 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 DR1Q01658 176 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 DSG1Q02413 1049 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 EFEMP1Q12805 493 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 MAPK7Q13164 816 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 MED21Q13503 144 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 STAT4Q14765 748 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 RCN1Q15293 331 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 SEC23AQ15436 765 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF174Q15697 407 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 DDB1Q16531 1140 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 PDK4Q16654 411 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 TRMT5Q32P41 509 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZC2HC1CQ53FD0 456 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 NOL9Q5SY16 702 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 IL23RQ5VWK5 629 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 CDCP2Q5VXM1 449 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 GRAMD4Q6IC98 578 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 RWDD4Q6NW29 188 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 DPY19L2P1Q6NXN4 242 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 RHBDF2Q6PJF5 856 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 PAQR3Q6TCH7 311 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 CYP2R1Q6VVX0 501 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 DSTYKQ6XUX3 929 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 KYAT3Q6YP21 454 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 H2AFVQ71UI9 128 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 MAEAQ7L5Y9 396 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 PEX26Q7Z412 305 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 LRP10Q7Z4F1 713 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 CABP7Q86V35 215 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZC3H18Q86VM9 953 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 PDSS2Q86YH6 399 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 TMPRSS6Q8IU80 811 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 MARVELD2Q8N4S9 558 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 ANKRD13CQ8N6S4 541 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 FBXO25Q8TCJ0 367 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 MAML1Q92585 1016 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 ERP27Q96DN0 273 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 MPP4Q96JB8 637 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms