RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 CST8O60676 142 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 SASH3O75995 380 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 F9P00740 461 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 LTFP02788 710 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 ECHS1P30084 290 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 KCNJ1P48048 391 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 SULT1E1P49888 294 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 BCAR1P56945 870 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 GPS2Q13227 327 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 SNX1Q13596 522 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 BYSLQ13895 437 aaKnown RBP23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 ANKS3Q6ZW76 656 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 SND1Q7KZF4 910 aaKnown RBP eCLIP23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 GPRIN1Q7Z2K8 1008 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 RFX6Q8HWS3 928 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 GSPT2Q8IYD1 628 aaKnown RBP23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 ATG4AQ8WYN0 398 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 TOP1MTQ969P6 601 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 VWCEQ96DN2 955 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 PGAP3Q96FM1 320 aaPredicted RBP23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 C8orf48Q96LL4 319 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 ZNF670Q9BS34 389 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 SNRNP25Q9BV90 132 aaKnown RBP23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 GPR62Q9BZJ7 368 aa23.22■■□□□ 1.31
PPFIA3-211ENST00000602848 CAPN9O14815 690 aa23.21■■□□□ 1.31
PPFIA3-211ENST00000602848 TRIM66O15016 1216 aa23.21■■□□□ 1.31
PPFIA3-211ENST00000602848 PTPRDP23468 1912 aa23.21■■□□□ 1.31
PPFIA3-211ENST00000602848 RDXP35241 583 aaKnown RBP23.21■■□□□ 1.31
PPFIA3-211ENST00000602848 ALDH7A1P49419 539 aaKnown RBP23.21■■□□□ 1.31
PPFIA3-211ENST00000602848 ADCY2Q08462 1091 aa23.21■■□□□ 1.31
PPFIA3-211ENST00000602848 DPYSL3Q14195 570 aa23.21■■□□□ 1.31
PPFIA3-211ENST00000602848 DPYSL2Q16555 572 aa23.21■■□□□ 1.31
PPFIA3-211ENST00000602848 NLRC5Q86WI3 1866 aa23.21■■□□□ 1.31
PPFIA3-211ENST00000602848 TMEM199Q8N511 208 aa23.21■■□□□ 1.31
PPFIA3-211ENST00000602848 C2orf15Q8WU43 125 aaKnown RBP23.21■■□□□ 1.31
PPFIA3-211ENST00000602848 RNF157Q96PX1 679 aa23.21■■□□□ 1.31
PPFIA3-211ENST00000602848 CALN1Q9BXU9 219 aa23.21■■□□□ 1.31
PPFIA3-211ENST00000602848 YJEFN3A6XGL0 299 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 E7ENQ6 273 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 APOC4-APOC2K7ER74 178 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 APOC2P02655 101 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 ITGAVP06756 1048 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 USP17L7P0C7H9 530 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 GRIK1P39086 918 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 RGS19P49795 217 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 VCPP55072 806 aaKnown RBP23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 KRT17Q04695 432 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 TRADDQ15628 312 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 RAB6CQ53S08 254 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 MFSD5Q6N075 450 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 CCDC89Q8N998 374 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 BBOF1Q8ND07 529 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 SLC35B2Q8TB61 432 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 NDRG1Q92597 394 aaKnown RBP23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 LRRC45Q96CN5 670 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 FAF2Q96CS3 445 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 RHOBTB2Q9BYZ6 727 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 RAB6CQ9H0N0 254 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 DPH5Q9H2P9 285 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 PCDH18Q9HCL0 1135 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 WHRNQ9P202 907 aa23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 RCOR3Q9P2K3 495 aaPredicted RBP23.2■■□□□ 1.3
PPFIA3-211ENST00000602848 TNFRSF10BO14763 440 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 TBC1D4O60343 1298 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 EFEMP2O95967 443 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 FYNP06241 537 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 CD48P09326 243 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 ITIH2P19823 946 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 CAV1Q03135 178 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 ZNF365Q70YC5 407 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 DDX42Q86XP3 938 aaKnown RBP eCLIP23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 CEP57Q86XR8 500 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 CCDC114Q96M63 670 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 TTPALQ9BTX7 342 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 CWH43Q9H720 699 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 SNX24Q9Y343 169 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 NEU2Q9Y3R4 380 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 LTBP2Q14767 1821 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 PATJQ8NI35 1801 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 M0QYT0 321 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 NDC80O14777 642 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 BAIAP3O94812 1187 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 RAG1P15918 1043 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 ZFXP17010 805 aaPredicted RBP23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 TFE3P19532 575 aaPredicted RBP23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 CYP2F1P24903 491 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 L1CAMP32004 1257 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 DEUP1Q05D60 604 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 GPR17Q13304 367 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 OASLQ15646 514 aaKnown RBP23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 ALS2CLQ60I27 953 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 BHLHA9Q7RTU4 235 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 ZDHHC18Q9NUE0 388 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 AP4E1Q9UPM8 1137 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 ZNF148Q9UQR1 794 aa23.19■■□□□ 1.3
PPFIA3-211ENST00000602848 TRIM43BA6NCK2 446 aa23.18■■□□□ 1.3
PPFIA3-211ENST00000602848 UPP2O95045 317 aa23.18■■□□□ 1.3
PPFIA3-211ENST00000602848 TGM2P21980 687 aa23.18■■□□□ 1.3
PPFIA3-211ENST00000602848 HSPA9P38646 679 aaKnown RBP23.18■■□□□ 1.3
PPFIA3-211ENST00000602848 RPL21P46778 160 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms