RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 MIS12Q9H081 205 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 HAUS4Q9H6D7 363 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 ST7Q9NRC1 585 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 GKN1Q9NS71 199 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 NAGPAQ9UK23 515 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 LUC7L2Q9Y383 392 aaKnown RBP14.42□□□□□ -0.1
VRK3-219ENST00000600137 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.42□□□□□ -0.1
VRK3-219ENST00000600137 CPQQ9Y646 472 aa14.42□□□□□ -0.1
VRK3-219ENST00000600137 COL4A2P08572 1712 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 FAM170AA1A519 330 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 PI4K2BG5E9Z4 385 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 DDX3XO00571 662 aaKnown RBP eCLIP14.41□□□□□ -0.13e-12■■□□□ 11.9
VRK3-219ENST00000600137 MDM4O15151 490 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 PSMC3P17980 439 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 MMP8P22894 467 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 PLCB2Q00722 1185 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 GOLGA8FQ08AF8 430 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 GOLGA8DPQ0D2H9 430 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 USP4Q13107 963 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 GRM2Q14416 872 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 CLEC16AQ2KHT3 1053 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 C2CD6Q53TS8 623 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 NAA35Q5VZE5 725 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 OLFML1Q6UWY5 402 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 SIX6OS1Q8N1H7 587 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 E2F7Q96AV8 911 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 ASIC4Q96FT7 647 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 FAM83CQ9BQN1 747 aa14.41□□□□□ -0.1
VRK3-219ENST00000600137 SHISA7A6NL88 538 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 LEFTY2O00292 366 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 LTFP02788 710 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 CKMP06732 381 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 PLEKP08567 350 aaPredicted RBP14.4□□□□□ -0.1
VRK3-219ENST00000600137 ATP5C1P36542 298 aaKnown RBP14.4□□□□□ -0.1
VRK3-219ENST00000600137 ZXDAP98168 799 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 CENPCQ03188 943 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 EIF4EBP2Q13542 120 aaPredicted RBP14.4□□□□□ -0.1
VRK3-219ENST00000600137 ASIC2Q16515 512 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 SYPL2Q5VXT5 272 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 MSANTD2Q6P1R3 559 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 TRIM72Q6ZMU5 477 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 FAM183BPQ6ZVS7 135 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 BEND5Q7L4P6 421 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 XYLT1Q86Y38 959 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 ARHGAP18Q8N392 663 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 BPIFB1Q8TDL5 484 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 SH3RF2Q8TEC5 729 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 DEPDC1BQ8WUY9 529 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 EDEM1Q92611 657 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 C18orf8Q96DM3 657 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 DNAJC7Q99615 494 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 NUCKS1Q9H1E3 243 aaKnown RBP14.4□□□□□ -0.1
VRK3-219ENST00000600137 KIF9Q9HAQ2 790 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 SLC2A4RGQ9NR83 387 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 ABCC13Q9NSE7 274 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 SMPD4Q9NXE4 827 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 TAS2R14Q9NYV8 317 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 ARHGAP20Q9P2F6 1191 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 DUSP12Q9UNI6 340 aa14.4□□□□□ -0.1
VRK3-219ENST00000600137 TCRBV5S1A1TA0A578 114 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 TNFRSF10AO00220 468 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 CHADO15335 359 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 CCDC172P0C7W6 258 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 MBL2P11226 248 aaPredicted RBP14.39□□□□□ -0.11
VRK3-219ENST00000600137 SRFP11831 508 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 PITX1P78337 314 aaPredicted RBP14.39□□□□□ -0.11
VRK3-219ENST00000600137 SLC6A3Q01959 620 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 KLHL30Q0D2K2 578 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 BTBD8Q5XKL5 378 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 ERICH1Q86X53 443 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 PHF13Q86YI8 300 aaPredicted RBP14.39□□□□□ -0.11
VRK3-219ENST00000600137 FMNL3Q8IVF7 1028 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 DRC7Q8IY82 874 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 ZNF397Q8NF99 534 aaPredicted RBP14.39□□□□□ -0.11
VRK3-219ENST00000600137 EDAQ92838 391 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 ZFYVE19Q96K21 471 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 SLC2A13Q96QE2 648 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 TRMT61BQ9BVS5 477 aaKnown RBP14.39□□□□□ -0.11
VRK3-219ENST00000600137 ADAM33Q9BZ11 813 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 PDCL3Q9H2J4 239 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 LINC00597Q9H2U6 94 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 EPHX3Q9H6B9 360 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 ASNSD1Q9NWL6 643 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 DNMT3LQ9UJW3 386 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 NENFQ9UMX5 172 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 NAALADL1Q9UQQ1 740 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 CEP83Q9Y592 693 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 F5P12259 2224 aa14.39□□□□□ -0.11
VRK3-219ENST00000600137 MYOFQ9NZM1 2061 aa14.38□□□□□ -0.11
VRK3-219ENST00000600137 OTOL1A6NHN0 477 aaPredicted RBP14.38□□□□□ -0.11
VRK3-219ENST00000600137 DCXO43602 365 aa14.38□□□□□ -0.11
VRK3-219ENST00000600137 MFAP3LO75121 409 aa14.38□□□□□ -0.11
VRK3-219ENST00000600137 KLKB1P03952 638 aa14.38□□□□□ -0.11
VRK3-219ENST00000600137 SERPING1P05155 500 aa14.38□□□□□ -0.11
VRK3-219ENST00000600137 GLI1P08151 1106 aa14.38□□□□□ -0.11
VRK3-219ENST00000600137 RALAP11233 206 aa14.38□□□□□ -0.11
VRK3-219ENST00000600137 TNFAIP3P21580 790 aa14.38□□□□□ -0.11
VRK3-219ENST00000600137 GDI1P31150 447 aa14.38□□□□□ -0.11
VRK3-219ENST00000600137 SCNN1AP37088 669 aa14.38□□□□□ -0.11
VRK3-219ENST00000600137 ADKP55263 362 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms