RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 IRF1P10914 325 aa18.17■□□□□ 0.5
SMG9-210ENST00000600097 TRIM21P19474 475 aaKnown RBP18.17■□□□□ 0.5
SMG9-210ENST00000600097 ZNF33AQ06730 810 aa18.17■□□□□ 0.5
SMG9-210ENST00000600097 GOLGA8FQ08AF8 430 aa18.17■□□□□ 0.5
SMG9-210ENST00000600097 GOLGA8DPQ0D2H9 430 aa18.17■□□□□ 0.5
SMG9-210ENST00000600097 SGSM1Q2NKQ1 1148 aa18.17■□□□□ 0.5
SMG9-210ENST00000600097 SCARA5Q6ZMJ2 495 aa18.17■□□□□ 0.5
SMG9-210ENST00000600097 PIP4P1Q86T03 277 aa18.17■□□□□ 0.5
SMG9-210ENST00000600097 CRYBG2Q8N1P7 616 aa18.17■□□□□ 0.5
SMG9-210ENST00000600097 PLEKHO2Q8TD55 490 aa18.17■□□□□ 0.5
SMG9-210ENST00000600097 SMOQ99835 787 aa18.17■□□□□ 0.5
SMG9-210ENST00000600097 BLZF1Q9H2G9 400 aa18.17■□□□□ 0.5
SMG9-210ENST00000600097 FOXD4L1Q9NU39 408 aa18.17■□□□□ 0.5
SMG9-210ENST00000600097 DNAJC17Q9NVM6 304 aaKnown RBP18.17■□□□□ 0.5
SMG9-210ENST00000600097 WDR35Q9P2L0 1181 aa18.17■□□□□ 0.5
SMG9-210ENST00000600097 LSM7Q9UK45 103 aaKnown RBP18.17■□□□□ 0.5
SMG9-210ENST00000600097 NEUROG3Q9Y4Z2 214 aa18.17■□□□□ 0.5
SMG9-210ENST00000600097 MYOFQ9NZM1 2061 aa18.17■□□□□ 0.5
SMG9-210ENST00000600097 ATXN2Q99700 1313 aaKnown RBP18.17■□□□□ 0.5
SMG9-210ENST00000600097 PLXND1Q9Y4D7 1925 aa18.16■□□□□ 0.5
SMG9-210ENST00000600097 A0A1W2PQF6 199 aa18.16■□□□□ 0.5
SMG9-210ENST00000600097 CACNG3O60359 315 aa18.16■□□□□ 0.5
SMG9-210ENST00000600097 RPN1P04843 607 aaKnown RBP18.16■□□□□ 0.5
SMG9-210ENST00000600097 RDXP35241 583 aaKnown RBP18.16■□□□□ 0.5
SMG9-210ENST00000600097 ATP5C1P36542 298 aaKnown RBP18.16■□□□□ 0.5
SMG9-210ENST00000600097 UNC93AQ86WB7 457 aa18.16■□□□□ 0.5
SMG9-210ENST00000600097 CHPFQ8IZ52 775 aa18.16■□□□□ 0.5
SMG9-210ENST00000600097 ZMIZ2Q8NF64 920 aa18.16■□□□□ 0.5
SMG9-210ENST00000600097 SLC2A14Q8TDB8 520 aa18.16■□□□□ 0.5
SMG9-210ENST00000600097 TMEM174Q8WUU8 243 aa18.16■□□□□ 0.5
SMG9-210ENST00000600097 TAF4BQ92750 862 aa18.16■□□□□ 0.5
SMG9-210ENST00000600097 WBP2Q969T9 261 aa18.16■□□□□ 0.5
SMG9-210ENST00000600097 GTPBP2Q9BX10 602 aaKnown RBP18.16■□□□□ 0.5
SMG9-210ENST00000600097 BBS2Q9BXC9 721 aa18.16■□□□□ 0.5
SMG9-210ENST00000600097 KLF16Q9BXK1 252 aaPredicted RBP18.16■□□□□ 0.5
SMG9-210ENST00000600097 SDCBP2Q9H190 292 aa18.16■□□□□ 0.5
SMG9-210ENST00000600097 CAPN10Q9HC96 672 aa18.16■□□□□ 0.5
SMG9-210ENST00000600097 CYLDQ9NQC7 956 aa18.16■□□□□ 0.5
SMG9-210ENST00000600097 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.16■□□□□ 0.5
SMG9-210ENST00000600097 FAM13BQ9NYF5 915 aa18.16■□□□□ 0.5
SMG9-210ENST00000600097 MARK1Q9P0L2 795 aa18.16■□□□□ 0.5
SMG9-210ENST00000600097 HCN2Q9UL51 889 aa18.16■□□□□ 0.5
SMG9-210ENST00000600097 IGF2RP11717 2491 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 MYO18AQ92614 2054 aaKnown RBP18.15■□□□□ 0.5
SMG9-210ENST00000600097 CACNA1GO43497 2377 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 IGHV1OR15-9A0A0B4J2B8 117 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 NEDD8-MDP1E9PL57 170 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 H0Y626 953 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 K7ELQ4 463 aaPredicted RBP18.15■□□□□ 0.5
SMG9-210ENST00000600097 TRIM24O15164 1050 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 GREM1O60565 184 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 OPHN1O60890 802 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 TRIM16O95361 564 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 VNN1O95497 513 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 CCDC130P13994 396 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 TYRP14679 529 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 CASP1P29466 404 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 WASP42768 502 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 NDST1P52848 882 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 MAP3K7CLP57077 242 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 SIM1P81133 766 aaPredicted RBP18.15■□□□□ 0.5
SMG9-210ENST00000600097 EGFLAMQ63HQ2 1017 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 MIB1Q86YT6 1006 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 SLC9A9Q8IVB4 645 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 IPO4Q8TEX9 1081 aaKnown RBP18.15■□□□□ 0.5
SMG9-210ENST00000600097 DMAC2Q9NW81 257 aa18.15■□□□□ 0.5
SMG9-210ENST00000600097 A0A1W2PQD8 194 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 GFRA2O00451 464 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 ARHGAP33O14559 1287 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 HYAL3O43820 417 aaPredicted RBP18.14■□□□□ 0.49
SMG9-210ENST00000600097 BEST1O76090 585 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 TBX18O95935 607 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 SYPP08247 313 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 FAM200BP0CF97 657 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 NDUFV2P19404 249 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 AFMP43652 599 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 CUL4BQ13620 913 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 HNRNPDQ14103 355 aaKnown RBP18.14■□□□□ 0.49
SMG9-210ENST00000600097 ZACNQ401N2 412 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 KIAA1211LQ6NV74 962 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 KLHDC10Q6PID8 442 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 DEFB119Q8N690 84 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 GABRG3Q99928 467 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 CD248Q9HCU0 757 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 RALYQ9UKM9 306 aaKnown RBP18.14■□□□□ 0.49
SMG9-210ENST00000600097 SCML2Q9UQR0 700 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 MSRB2Q9Y3D2 182 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 PCNX2A6NKB5 2137 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 PI4KAP42356 2102 aa18.14■□□□□ 0.49
SMG9-210ENST00000600097 TNRC6BQ9UPQ9 1833 aaKnown RBP18.14■□□□□ 0.49
SMG9-210ENST00000600097 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.13■□□□□ 0.49
SMG9-210ENST00000600097 SPAARA0A1B0GVQ0 90 aa18.13■□□□□ 0.49
SMG9-210ENST00000600097 IKBKBO14920 756 aa18.13■□□□□ 0.49
SMG9-210ENST00000600097 PDIA4P13667 645 aaKnown RBP18.13■□□□□ 0.49
SMG9-210ENST00000600097 PGFP49763 221 aa18.13■□□□□ 0.49
SMG9-210ENST00000600097 TPGS1Q6ZTW0 290 aa18.13■□□□□ 0.49
SMG9-210ENST00000600097 CEP57L1Q8IYX8 460 aa18.13■□□□□ 0.49
SMG9-210ENST00000600097 MINDY1Q8N5J2 469 aa18.13■□□□□ 0.49
SMG9-210ENST00000600097 TMC2Q8TDI7 906 aa18.13■□□□□ 0.49
SMG9-210ENST00000600097 ZCCHC14Q8WYQ9 949 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms