RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 ACAD10Q6JQN1 1059 aa15.05■□□□□ -0
VRK3-213ENST00000597215 KLHDC10Q6PID8 442 aa15.05■□□□□ -0
VRK3-213ENST00000597215 WDR59Q6PJI9 974 aa15.05■□□□□ -0
VRK3-213ENST00000597215 PARM1Q6UWI2 310 aa15.05■□□□□ -0
VRK3-213ENST00000597215 MMS22LQ6ZRQ5 1243 aa15.05■□□□□ -0
VRK3-213ENST00000597215 FAM183BPQ6ZVS7 135 aa15.05■□□□□ -0
VRK3-213ENST00000597215 RSRC2Q7L4I2 434 aaKnown RBP15.05■□□□□ -0
VRK3-213ENST00000597215 PHF13Q86YI8 300 aaPredicted RBP15.05■□□□□ -0
VRK3-213ENST00000597215 TC2NQ8N9U0 490 aa15.05■□□□□ -0
VRK3-213ENST00000597215 SLC30A5Q8TAD4 765 aa15.05■□□□□ -0
VRK3-213ENST00000597215 OLIG1Q8TAK6 271 aa15.05■□□□□ -0
VRK3-213ENST00000597215 ELSPBP1Q96BH3 223 aa15.05■□□□□ -0
VRK3-213ENST00000597215 SLC22A12Q96S37 553 aa15.05■□□□□ -0
VRK3-213ENST00000597215 CYP2S1Q96SQ9 504 aa15.05■□□□□ -0
VRK3-213ENST00000597215 ABCC13Q9NSE7 274 aa15.05■□□□□ -0
VRK3-213ENST00000597215 OLA1Q9NTK5 396 aaKnown RBP15.05■□□□□ -0
VRK3-213ENST00000597215 TDP1Q9NUW8 608 aa15.05■□□□□ -0
VRK3-213ENST00000597215 ASNSD1Q9NWL6 643 aa15.05■□□□□ -0
VRK3-213ENST00000597215 OBP2AQ9NY56 170 aa15.05■□□□□ -0
VRK3-213ENST00000597215 ARHGAP20Q9P2F6 1191 aa15.05■□□□□ -0
VRK3-213ENST00000597215 IGSF9Q9P2J2 1179 aa15.05■□□□□ -0
VRK3-213ENST00000597215 IMPACTQ9P2X3 320 aa15.05■□□□□ -0
VRK3-213ENST00000597215 STRIP2Q9ULQ0 834 aa15.05■□□□□ -0
VRK3-213ENST00000597215 ARHGAP26Q9UNA1 814 aa15.05■□□□□ -0
VRK3-213ENST00000597215 FAM170AA1A519 330 aa15.04■□□□□ -0
VRK3-213ENST00000597215 DDX3XO00571 662 aaKnown RBP eCLIP15.04■□□□□ -03e-12■■□□□ 11.9
VRK3-213ENST00000597215 ECI2O75521 394 aa15.04■□□□□ -0
VRK3-213ENST00000597215 PRAMEF12O95522 483 aa15.04■□□□□ -0
VRK3-213ENST00000597215 CALB1P05937 261 aa15.04■□□□□ -0
VRK3-213ENST00000597215 GLI1P08151 1106 aa15.04■□□□□ -0
VRK3-213ENST00000597215 PLEKP08567 350 aaPredicted RBP15.04■□□□□ -0
VRK3-213ENST00000597215 GZMAP12544 262 aa15.04■□□□□ -0
VRK3-213ENST00000597215 ATP5C1P36542 298 aaKnown RBP15.04■□□□□ -0
VRK3-213ENST00000597215 SCNN1AP37088 669 aa15.04■□□□□ -0
VRK3-213ENST00000597215 SLC6A3Q01959 620 aa15.04■□□□□ -0
VRK3-213ENST00000597215 C1QBPQ07021 282 aaKnown RBP15.04■□□□□ -0
VRK3-213ENST00000597215 C10orf120Q5SQS8 335 aa15.04■□□□□ -0
VRK3-213ENST00000597215 TANGO2Q6ICL3 276 aa15.04■□□□□ -0
VRK3-213ENST00000597215 OLFML1Q6UWY5 402 aa15.04■□□□□ -0
VRK3-213ENST00000597215 HFE2Q6ZVN8 426 aa15.04■□□□□ -0
VRK3-213ENST00000597215 MON1BQ7L1V2 547 aa15.04■□□□□ -0
VRK3-213ENST00000597215 BEND5Q7L4P6 421 aa15.04■□□□□ -0
VRK3-213ENST00000597215 SLC26A9Q7LBE3 791 aa15.04■□□□□ -0
VRK3-213ENST00000597215 XYLT1Q86Y38 959 aa15.04■□□□□ -0
VRK3-213ENST00000597215 GJD3Q8N144 294 aa15.04■□□□□ -0
VRK3-213ENST00000597215 CELF5Q8N6W0 485 aaKnown RBP15.04■□□□□ -0
VRK3-213ENST00000597215 RNF139Q8WU17 664 aa15.04■□□□□ -0
VRK3-213ENST00000597215 FGF14Q92915 247 aa15.04■□□□□ -0
VRK3-213ENST00000597215 UHRF1Q96T88 793 aaPredicted RBP15.04■□□□□ -0
VRK3-213ENST00000597215 C11orf70Q9BRQ4 267 aa15.04■□□□□ -0
VRK3-213ENST00000597215 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.04■□□□□ -0
VRK3-213ENST00000597215 RNF38Q9H0F5 515 aa15.04■□□□□ -0
VRK3-213ENST00000597215 DEF6Q9H4E7 631 aa15.04■□□□□ -0
VRK3-213ENST00000597215 KCNK12Q9HB15 430 aa15.04■□□□□ -0
VRK3-213ENST00000597215 ADAM22Q9P0K1 906 aa15.04■□□□□ -0
VRK3-213ENST00000597215 ADAMTS1Q9UHI8 967 aa15.04■□□□□ -0
VRK3-213ENST00000597215 DNMT3LQ9UJW3 386 aa15.04■□□□□ -0
VRK3-213ENST00000597215 NUMBLQ9Y6R0 609 aa15.04■□□□□ -0
VRK3-213ENST00000597215 SSU72P8A0A1W2PR75 194 aa15.03■□□□□ -0
VRK3-213ENST00000597215 HSF2BPO75031 334 aa15.03■□□□□ -0
VRK3-213ENST00000597215 TBX18O95935 607 aa15.03■□□□□ -0
VRK3-213ENST00000597215 VIPR2P41587 438 aa15.03■□□□□ -0
VRK3-213ENST00000597215 CDK17Q00537 523 aa15.03■□□□□ -0
VRK3-213ENST00000597215 MAPK8IP2Q13387 824 aaPredicted RBP15.03■□□□□ -0
VRK3-213ENST00000597215 DDX42Q86XP3 938 aaKnown RBP eCLIP15.03■□□□□ -0
VRK3-213ENST00000597215 SPC24Q8NBT2 197 aa15.03■□□□□ -0
VRK3-213ENST00000597215 DEPDC1BQ8WUY9 529 aa15.03■□□□□ -0
VRK3-213ENST00000597215 EDEM1Q92611 657 aa15.03■□□□□ -0
VRK3-213ENST00000597215 USP13Q92995 863 aaPredicted RBP15.03■□□□□ -0
VRK3-213ENST00000597215 PIWIL1Q96J94 861 aaKnown RBP15.03■□□□□ -0
VRK3-213ENST00000597215 NECAB3Q96P71 396 aaPredicted RBP15.03■□□□□ -0
VRK3-213ENST00000597215 PANX2Q96RD6 677 aa15.03■□□□□ -0
VRK3-213ENST00000597215 KXD1Q9BQD3 176 aa15.03■□□□□ -0
VRK3-213ENST00000597215 SMG9Q9H0W8 520 aaKnown RBP15.03■□□□□ -0
VRK3-213ENST00000597215 POPDC2Q9HBU9 364 aa15.03■□□□□ -0
VRK3-213ENST00000597215 TAS2R14Q9NYV8 317 aa15.03■□□□□ -0
VRK3-213ENST00000597215 WDR35Q9P2L0 1181 aa15.03■□□□□ -0
VRK3-213ENST00000597215 NUDT5Q9UKK9 219 aa15.03■□□□□ -0
VRK3-213ENST00000597215 CPQQ9Y646 472 aa15.03■□□□□ -0
VRK3-213ENST00000597215 MYO10Q9HD67 2058 aa15.02■□□□□ -0
VRK3-213ENST00000597215 HEPACAM2A8MVW5 462 aa15.02■□□□□ -0
VRK3-213ENST00000597215 TMCO5BA8MYB1 307 aa15.02■□□□□ -0
VRK3-213ENST00000597215 CAPN9O14815 690 aa15.02■□□□□ -0
VRK3-213ENST00000597215 MDM4O15151 490 aa15.02■□□□□ -0
VRK3-213ENST00000597215 RTN2O75298 545 aa15.02■□□□□ -0
VRK3-213ENST00000597215 ASGR2P07307 311 aa15.02■□□□□ -0
VRK3-213ENST00000597215 NCAM1P13591 858 aa15.02■□□□□ -0
VRK3-213ENST00000597215 TCF3P15923 654 aa15.02■□□□□ -0
VRK3-213ENST00000597215 EIF4A3P38919 411 aaKnown RBP15.02■□□□□ -0
VRK3-213ENST00000597215 MRE11P49959 708 aa15.02■□□□□ -0
VRK3-213ENST00000597215 GSCP56915 257 aaPredicted RBP15.02■□□□□ -0
VRK3-213ENST00000597215 YWHAZP63104 245 aaKnown RBP15.02■□□□□ -0
VRK3-213ENST00000597215 PTP4A2Q12974 167 aa15.02■□□□□ -0
VRK3-213ENST00000597215 USP4Q13107 963 aa15.02■□□□□ -0
VRK3-213ENST00000597215 C2CD6Q53TS8 623 aa15.02■□□□□ -0
VRK3-213ENST00000597215 FAM102AQ5T9C2 384 aaPredicted RBP15.02■□□□□ -0
VRK3-213ENST00000597215 MSANTD2Q6P1R3 559 aa15.02■□□□□ -0
VRK3-213ENST00000597215 VITQ6UXI7 678 aa15.02■□□□□ -0
VRK3-213ENST00000597215 RNF135Q8IUD6 432 aa15.02■□□□□ -0
VRK3-213ENST00000597215 MCOLN2Q8IZK6 566 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms