RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 OXCT2Q9BYC2 517 aaPredicted RBP13.81□□□□□ -0.2
VRK3-205ENST00000593919 ADAM33Q9BZ11 813 aa13.81□□□□□ -0.2
VRK3-205ENST00000593919 SLITRK6Q9H5Y7 841 aa13.81□□□□□ -0.2
VRK3-205ENST00000593919 NGRNQ9NPE2 291 aaKnown RBP13.81□□□□□ -0.2
VRK3-205ENST00000593919 PSD3Q9NYI0 1048 aa13.81□□□□□ -0.2
VRK3-205ENST00000593919 MTRRQ9UBK8 725 aa13.81□□□□□ -0.2
VRK3-205ENST00000593919 USP18Q9UMW8 372 aa13.81□□□□□ -0.2
VRK3-205ENST00000593919 NR2E1Q9Y466 385 aa13.81□□□□□ -0.2
VRK3-205ENST00000593919 INSL6Q9Y581 213 aa13.81□□□□□ -0.2
VRK3-205ENST00000593919 SLC4A7Q9Y6M7 1214 aa13.81□□□□□ -0.2
VRK3-205ENST00000593919 GBF1Q92538 1859 aa13.81□□□□□ -0.2
VRK3-205ENST00000593919 CARNS1A5YM72 827 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 TNFRSF10BO14763 440 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 TTI1O43156 1089 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 ADAM12O43184 909 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 DAB1O75553 588 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 VNN2O95498 520 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 PCK1P35558 622 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 MATKP42679 507 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 GPR15P49685 360 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 YWHAZP63104 245 aaKnown RBP13.8□□□□□ -0.2
VRK3-205ENST00000593919 LLGL1Q15334 1064 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 SLC8B1Q6J4K2 584 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 BHLHA9Q7RTU4 235 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 POLNQ7Z5Q5 900 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 HERC6Q8IVU3 1022 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 DEFB106AQ8N104 65 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 FIBCD1Q8N539 461 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 CCDC26Q8TAB7 109 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 ACSF2Q96CM8 615 aaPredicted RBP13.8□□□□□ -0.2
VRK3-205ENST00000593919 ZIM3Q96PE6 472 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 SLC9A7Q96T83 725 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 C11orf84Q9BUA3 381 aaPredicted RBP13.8□□□□□ -0.2
VRK3-205ENST00000593919 PLVAPQ9BX97 442 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 ZWILCHQ9H900 591 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 POPDC2Q9HBU9 364 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.8□□□□□ -0.2
VRK3-205ENST00000593919 PCSK1NQ9UHG2 260 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 WDR27A2RRH5 827 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 ATP2A2P16615 1042 aaKnown RBP13.8□□□□□ -0.2
VRK3-205ENST00000593919 PPM1AP35813 382 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 MAGEA11P43364 429 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 PTPN9P43378 593 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 GLUD2P49448 558 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 ROR1Q01973 937 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 DSG1Q02413 1049 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 DDR2Q16832 855 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 HADHQ16836 314 aaKnown RBP13.8□□□□□ -0.2
VRK3-205ENST00000593919 DCAF6Q58WW2 860 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 KCNT1Q5JUK3 1230 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 ZFYVE27Q5T4F4 411 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 SDHAF4Q5VUM1 108 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 ALS2CLQ60I27 953 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 PM20D1Q6GTS8 502 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 DDX53Q86TM3 631 aaKnown RBP13.8□□□□□ -0.2
VRK3-205ENST00000593919 CCDC50Q8IVM0 306 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 STKLD1Q8NE28 680 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 EXD1Q8NHP7 514 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 SPPL2BQ8TCT7 592 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 DPF3Q92784 378 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 CLP1Q92989 425 aaKnown RBP13.8□□□□□ -0.2
VRK3-205ENST00000593919 PEBP4Q96S96 227 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 NAP1L3Q99457 506 aaPredicted RBP13.8□□□□□ -0.2
VRK3-205ENST00000593919 LBHD1Q9BQE6 289 aaPredicted RBP13.8□□□□□ -0.2
VRK3-205ENST00000593919 DDX23Q9BUQ8 820 aaKnown RBP13.8□□□□□ -0.2
VRK3-205ENST00000593919 HERC2P3Q9BVR0 1158 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 CRISPLD1Q9H336 500 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 AAASQ9NRG9 546 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 WDR70Q9NW82 654 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 PCDHB12Q9Y5F1 795 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 BACE2Q9Y5Z0 518 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 USP3Q9Y6I4 520 aa13.8□□□□□ -0.2
VRK3-205ENST00000593919 MYO7AQ13402 2215 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 COL4A4P53420 1690 aaPredicted RBP13.79□□□□□ -0.2
VRK3-205ENST00000593919 GOLGA6L10A0A0M3HER8 536 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 TRIM66O15016 1216 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 OPA1O60313 960 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 SOAT2O75908 522 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 LTFP02788 710 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 FYNP06241 537 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 KRT7P08729 469 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 DESP17661 470 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 OR1D2P34982 312 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 HDAC4P56524 1084 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 SMARCB1Q12824 385 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 IFRD2Q12894 506 aaPredicted RBP13.79□□□□□ -0.2
VRK3-205ENST00000593919 CUL1Q13616 776 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 CFAP58Q5T655 872 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 CYP4V2Q6ZWL3 525 aaPredicted RBP13.79□□□□□ -0.2
VRK3-205ENST00000593919 MAATS1Q7Z4T9 603 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 SCML4Q8N228 414 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 C8orf48Q96LL4 319 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 SLC2A13Q96QE2 648 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 RAD9AQ99638 391 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 CLSTN3Q9BQT9 956 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 TRIM51Q9BSJ1 452 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 DPH5Q9H2P9 285 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 SLC27A5Q9Y2P5 690 aa13.79□□□□□ -0.2
VRK3-205ENST00000593919 TCRBV7S2A1N4TA0A589 114 aa13.78□□□□□ -0.2
VRK3-205ENST00000593919 LCHNA4D1U4 455 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms