RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 DRD1P21728 446 aa13.97□□□□□ -0.17
H3F3B-213ENST00000593254 GALK1P51570 392 aa13.97□□□□□ -0.17
H3F3B-213ENST00000593254 SNX30Q5VWJ9 437 aa13.97□□□□□ -0.17
H3F3B-213ENST00000593254 NAIF1Q69YI7 327 aaPredicted RBP13.97□□□□□ -0.17
H3F3B-213ENST00000593254 KRT39Q6A163 491 aa13.97□□□□□ -0.17
H3F3B-213ENST00000593254 ZC3H3Q8IXZ2 948 aaKnown RBP13.97□□□□□ -0.17
H3F3B-213ENST00000593254 C12orf29Q8N999 325 aa13.97□□□□□ -0.17
H3F3B-213ENST00000593254 EEF2KMTQ96G04 330 aa13.97□□□□□ -0.17
H3F3B-213ENST00000593254 TWNKQ96RR1 684 aa13.97□□□□□ -0.17
H3F3B-213ENST00000593254 SMOQ99835 787 aa13.97□□□□□ -0.17
H3F3B-213ENST00000593254 P2RY13Q9BPV8 354 aa13.97□□□□□ -0.17
H3F3B-213ENST00000593254 LINC00597Q9H2U6 94 aa13.97□□□□□ -0.17
H3F3B-213ENST00000593254 MMRN2Q9H8L6 949 aa13.97□□□□□ -0.17
H3F3B-213ENST00000593254 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.97□□□□□ -0.176e-7■■■■□ 20.3
H3F3B-213ENST00000593254 FAM49BQ9NUQ9 324 aa13.97□□□□□ -0.17
H3F3B-213ENST00000593254 COMMD8Q9NX08 183 aa13.97□□□□□ -0.17
H3F3B-213ENST00000593254 PCDHA5Q9Y5H7 936 aa13.97□□□□□ -0.17
H3F3B-213ENST00000593254 CPQQ9Y646 472 aa13.97□□□□□ -0.17
H3F3B-213ENST00000593254 CILPO75339 1184 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 BEST1O76090 585 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 SMC2O95347 1197 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 NFATC1O95644 943 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 ZDHHC11BP0C7U3 371 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 EPB41P11171 864 aaKnown RBP13.96□□□□□ -0.17
H3F3B-213ENST00000593254 MXI1P50539 228 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 TUBP50607 506 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 NR1H3Q13133 447 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 SYT13Q7L8C5 426 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 WHAMMQ8TF30 809 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 ZCCHC14Q8WYQ9 949 aaKnown RBP13.96□□□□□ -0.17
H3F3B-213ENST00000593254 SEMA4DQ92854 862 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 ERCC4Q92889 916 aaPredicted RBP13.96□□□□□ -0.17
H3F3B-213ENST00000593254 SMARCE1Q969G3 411 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 EXOC4Q96A65 974 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 FAXDC2Q96IV6 333 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 HNRNPABQ99729 332 aaKnown RBP13.96□□□□□ -0.17
H3F3B-213ENST00000593254 NT5C1AQ9BXI3 368 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 GTPBP4Q9BZE4 634 aaKnown RBP13.96□□□□□ -0.17
H3F3B-213ENST00000593254 TMEM9BQ9NQ34 198 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 SMPD4Q9NXE4 827 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 LHX6Q9UPM6 363 aa13.96□□□□□ -0.17
H3F3B-213ENST00000593254 BPTFQ12830 3046 aa13.96□□□□□ -0.18
H3F3B-213ENST00000593254 ASH1LQ9NR48 2969 aaKnown RBP13.95□□□□□ -0.18
H3F3B-213ENST00000593254 SLC16A3O15427 465 aaKnown RBP13.95□□□□□ -0.18
H3F3B-213ENST00000593254 COCHO43405 550 aa13.95□□□□□ -0.18
H3F3B-213ENST00000593254 FAM200BP0CF97 657 aa13.95□□□□□ -0.18
H3F3B-213ENST00000593254 MBL2P11226 248 aaPredicted RBP13.95□□□□□ -0.18
H3F3B-213ENST00000593254 TRIM21P19474 475 aaKnown RBP13.95□□□□□ -0.18
H3F3B-213ENST00000593254 PMS1P54277 932 aaKnown RBP13.95□□□□□ -0.18
H3F3B-213ENST00000593254 MAP3K7CLP57077 242 aa13.95□□□□□ -0.18
H3F3B-213ENST00000593254 FBXO43Q4G163 708 aa13.95□□□□□ -0.18
H3F3B-213ENST00000593254 HECTD3Q5T447 861 aa13.95□□□□□ -0.18
H3F3B-213ENST00000593254 PMS2CLQ68D20 193 aa13.95□□□□□ -0.18
H3F3B-213ENST00000593254 CLEC20AQ6ZU45 233 aa13.95□□□□□ -0.18
H3F3B-213ENST00000593254 FILIP1Q7Z7B0 1213 aa13.95□□□□□ -0.18
H3F3B-213ENST00000593254 DDX42Q86XP3 938 aaKnown RBP eCLIP13.95□□□□□ -0.184e-9■□□□□ 9.6
H3F3B-213ENST00000593254 ELOA2Q8IYF1 753 aaPredicted RBP13.95□□□□□ -0.18
H3F3B-213ENST00000593254 CCDC150Q8NCX0 1101 aa13.95□□□□□ -0.18
H3F3B-213ENST00000593254 FBXL13Q8NEE6 735 aa13.95□□□□□ -0.18
H3F3B-213ENST00000593254 EZH1Q92800 747 aaPredicted RBP13.95□□□□□ -0.18
H3F3B-213ENST00000593254 CD101Q93033 1021 aa13.95□□□□□ -0.18
H3F3B-213ENST00000593254 ZFRQ96KR1 1074 aaKnown RBP13.95□□□□□ -0.18
H3F3B-213ENST00000593254 TSG101Q99816 390 aa13.95□□□□□ -0.18
H3F3B-213ENST00000593254 FBXO44Q9H4M3 255 aa13.95□□□□□ -0.18
H3F3B-213ENST00000593254 GMIPQ9P107 970 aa13.95□□□□□ -0.18
H3F3B-213ENST00000593254 CHORDC1Q9UHD1 332 aaPredicted RBP13.95□□□□□ -0.18
H3F3B-213ENST00000593254 HOOK1Q9UJC3 728 aaKnown RBP13.95□□□□□ -0.18
H3F3B-213ENST00000593254 ACACAQ13085 2346 aa13.95□□□□□ -0.18
H3F3B-213ENST00000593254 ADAMTS20P59510 1910 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 HHLA1C9JL84 531 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 TAF4O00268 1085 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 SLC9A3R1O14745 358 aaPredicted RBP13.94□□□□□ -0.18
H3F3B-213ENST00000593254 STX10O60499 249 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 APBB3O95704 486 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 CYP17A1P05093 508 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 CD58P19256 250 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 ADORA2BP29275 332 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 OPRD1P41143 372 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 FKBP3Q00688 224 aaKnown RBP13.94□□□□□ -0.18
H3F3B-213ENST00000593254 LRRC63Q05C16 580 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 GAB4Q2WGN9 574 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 ANKRD40Q6AI12 368 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 ADGRG2Q8IZP9 1017 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 RPLP0P6Q8NHW5 317 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 CYFIP2Q96F07 1278 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 FAM124BQ9H5Z6 455 aaPredicted RBP13.94□□□□□ -0.18
H3F3B-213ENST00000593254 CCSER2Q9H7U1 834 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 PNPLA8Q9NP80 782 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 RAB20Q9NX57 234 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 CFAP97Q9P2B7 532 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 NEUROG3Q9Y4Z2 214 aa13.94□□□□□ -0.18
H3F3B-213ENST00000593254 TNRC6BQ9UPQ9 1833 aaKnown RBP13.94□□□□□ -0.18
H3F3B-213ENST00000593254 E2F8A0AVK6 867 aa13.93□□□□□ -0.18
H3F3B-213ENST00000593254 TRIM49BA6NDI0 452 aa13.93□□□□□ -0.18
H3F3B-213ENST00000593254 PATE3B3GLJ2 98 aa13.93□□□□□ -0.18
H3F3B-213ENST00000593254 KHNYNO15037 678 aaKnown RBP13.93□□□□□ -0.18
H3F3B-213ENST00000593254 PGFP49763 221 aa13.93□□□□□ -0.18
H3F3B-213ENST00000593254 DMC1Q14565 340 aa13.93□□□□□ -0.18
H3F3B-213ENST00000593254 DHCR24Q15392 516 aa13.93□□□□□ -0.18
H3F3B-213ENST00000593254 GPRIN1Q7Z2K8 1008 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms