RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 AP5Z1O43299 807 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 SH3BP5O60239 455 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 RTN3O95197 1032 aaPredicted RBP11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 ZDHHC11BP0C7U3 371 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 CD59P13987 128 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 TYRP14679 529 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 NTSR1P30989 418 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 AFMP43652 599 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 NASPP49321 788 aaPredicted RBP11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 ATXN3P54252 364 aaPredicted RBP11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 GFPT1Q06210 699 aaPredicted RBP11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 DUOXA1Q1HG43 343 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 ZNF699Q32M78 642 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 GRAMD4Q6IC98 578 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 C19orf48Q6RUI8 117 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 STXBP4Q6ZWJ1 553 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 DDX42Q86XP3 938 aaKnown RBP eCLIP11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 CACUL1Q86Y37 369 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 MARCH9Q86YJ5 346 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 CHPFQ8IZ52 775 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 HDDC3Q8N4P3 179 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 SLC2A14Q8TDB8 520 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 IPO4Q8TEX9 1081 aaKnown RBP11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 CEP295NLQ96MC4 621 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 TWNKQ96RR1 684 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 BBS2Q9BXC9 721 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 KLF16Q9BXK1 252 aaPredicted RBP11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 NMUR1Q9HB89 426 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 DMAP1Q9NPF5 467 aaPredicted RBP11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 EHD2Q9NZN4 543 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 SLC6A14Q9UN76 642 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 LHX6Q9UPM6 363 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 PLXNB3Q9ULL4 1909 aa11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 IGF2RP11717 2491 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 SPEGQ15772 3267 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 SPTLC2O15270 562 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 TLR5O60602 858 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 EXOC3O60645 756 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 OPHN1O60890 802 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 C4BPAP04003 597 aaKnown RBP11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 SERPINF2P08697 491 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 PDCP20941 246 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 NDST1P52848 882 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 EHHADHQ08426 723 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 CUL4BQ13620 913 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 NCOA4Q13772 614 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 HSF5Q4G112 596 aaPredicted RBP11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 ZNF667Q5HYK9 610 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 KIAA1324Q6UXG2 1013 aaKnown RBP11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 RGL4Q8IZJ4 473 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 PDZD8Q8NEN9 1154 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 SYAP1Q96A49 352 aaPredicted RBP11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 SMARCD1Q96GM5 515 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 KIAA1586Q9HCI6 787 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 IL37Q9NZH6 218 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 MSRB2Q9Y3D2 182 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 NEUROG3Q9Y4Z2 214 aa11.85□□□□□ -0.51
PRKCSH-220ENST00000593104 A0A1W2PQH9 124 aa11.84□□□□□ -0.51
PRKCSH-220ENST00000593104 ARHGAP33O14559 1287 aa11.84□□□□□ -0.51
PRKCSH-220ENST00000593104 POLR2DO15514 142 aaKnown RBP11.84□□□□□ -0.51
PRKCSH-220ENST00000593104 STAU1O95793 577 aaKnown RBP11.84□□□□□ -0.51
PRKCSH-220ENST00000593104 PLEKHG6Q3KR16 790 aa11.84□□□□□ -0.51
PRKCSH-220ENST00000593104 SNX30Q5VWJ9 437 aa11.84□□□□□ -0.51
PRKCSH-220ENST00000593104 UNC13DQ70J99 1090 aa11.84□□□□□ -0.51
PRKCSH-220ENST00000593104 OVCA2Q8WZ82 227 aa11.84□□□□□ -0.51
PRKCSH-220ENST00000593104 OTUB2Q96DC9 234 aa11.84□□□□□ -0.51
PRKCSH-220ENST00000593104 MRGPRX1Q96LB2 322 aa11.84□□□□□ -0.51
PRKCSH-220ENST00000593104 C7orf25Q9BPX7 421 aa11.84□□□□□ -0.51
PRKCSH-220ENST00000593104 UPF2Q9HAU5 1272 aaKnown RBP11.84□□□□□ -0.51
PRKCSH-220ENST00000593104 IL21RQ9HBE5 538 aa11.84□□□□□ -0.51
PRKCSH-220ENST00000593104 SLCO1B1Q9Y6L6 691 aa11.84□□□□□ -0.51
PRKCSH-220ENST00000593104 AKAP13Q12802 2813 aa11.84□□□□□ -0.51
PRKCSH-220ENST00000593104 ASPMQ8IZT6 3477 aa11.84□□□□□ -0.51
PRKCSH-220ENST00000593104 CHD6Q8TD26 2715 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 FAM92AA1XBS5 289 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 TMEM8BA6NDV4 472 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 HHLA1C9JL84 531 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 STX6O43752 255 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 CACNG3O60359 315 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 GJB3O75712 270 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 HMBSP08397 361 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 CISD3P0C7P0 127 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 ATICP31939 592 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 TUBP50607 506 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 BYSLQ13895 437 aaKnown RBP11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 KNOP1Q1ED39 458 aaKnown RBP11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 LRSAM1Q6UWE0 723 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 SLC36A4Q6YBV0 504 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 HTR3DQ70Z44 454 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 KIAA1958Q8N8K9 716 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 KIAA0895Q8NCT3 520 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 PARD3BQ8TEW8 1205 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 SORCS1Q8WY21 1168 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 GABRG3Q99928 467 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 CLEC4EQ9ULY5 219 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 ADAMTS20P59510 1910 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 ATP8B3O60423 1300 aa11.83□□□□□ -0.52
PRKCSH-220ENST00000593104 WDFY3Q8IZQ1 3526 aa11.82□□□□□ -0.52
PRKCSH-220ENST00000593104 KCNJ18B7U540 433 aa11.82□□□□□ -0.52
PRKCSH-220ENST00000593104 KLRC4O43908 158 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms