RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 PAQR9Q6ZVX9 377 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 H2AFVQ71UI9 128 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 GPR149Q86SP6 731 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 SLC44A3Q8N4M1 653 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 RNF10Q8N5U6 811 aaKnown RBP12.52□□□□□ -0.41
DDX39A-219ENST00000592927 NETO1Q8TDF5 533 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 GPR152Q8TDT2 470 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 SLC20A1Q8WUM9 679 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 TFAP2BQ92481 460 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 SMG7Q92540 1137 aaKnown RBP12.52□□□□□ -0.41
DDX39A-219ENST00000592927 CALR3Q96L12 384 aaKnown RBP12.52□□□□□ -0.41
DDX39A-219ENST00000592927 ZNF512Q96ME7 567 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-219ENST00000592927 PRKD2Q9BZL6 878 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 FOXQ1Q9C009 403 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 ISCUQ9H1K1 167 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 EPC1Q9H2F5 836 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 PIDD1Q9HB75 910 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 DMAP1Q9NPF5 467 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-219ENST00000592927 SEPT11Q9NVA2 429 aaKnown RBP12.52□□□□□ -0.41
DDX39A-219ENST00000592927 HESX1Q9UBX0 185 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 FBXO4Q9UKT5 387 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 PCDHGA2Q9Y5H1 932 aa12.52□□□□□ -0.41
DDX39A-219ENST00000592927 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.52□□□□□ -0.41
DDX39A-219ENST00000592927 A0A0A6YYK5 440 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-219ENST00000592927 ANKRD62A6NC57 917 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 F8VP50 259 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 O00370 1275 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 THAP12O43422 761 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 LAMTOR5O43504 91 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 POU2F2P09086 479 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 SRFP11831 508 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 GPR15P49685 360 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 MAP3K7CLP57077 242 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 SPEM2Q0P670 501 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 IFI16Q16666 785 aaKnown RBP12.51□□□□□ -0.41
DDX39A-219ENST00000592927 SDHAF4Q5VUM1 108 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 LCLAT1Q6UWP7 414 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 ITIH5Q86UX2 942 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 ANKRD52Q8NB46 1076 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 ZBTB44Q8NCP5 570 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 PJA1Q8NG27 643 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 GIPC2Q8TF65 315 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 ZNF606Q8WXB4 792 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 ZNF707Q96C28 371 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-219ENST00000592927 C8orf48Q96LL4 319 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 CEP295NLQ96MC4 621 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 DUSP16Q9BY84 665 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 PDCL3Q9H2J4 239 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 ACP6Q9NPH0 428 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 ARHGEF3Q9NR81 526 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 SPATA6Q9NWH7 488 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-219ENST00000592927 TSPAN16Q9UKR8 245 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 ZMIZ1Q9ULJ6 1067 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 GUCA1BQ9UMX6 200 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 PCDHGC3Q9UN70 934 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.51□□□□□ -0.41
DDX39A-219ENST00000592927 ASB3Q9Y575 518 aa12.51□□□□□ -0.41
DDX39A-219ENST00000592927 MYH10P35580 1976 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 RCCD1A6NED2 376 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 MICAL2O94851 1124 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 PAPLNO95428 1278 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 LSM8O95777 96 aaKnown RBP12.5□□□□□ -0.41
DDX39A-219ENST00000592927 MMEP08473 750 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 TMEM253P0C7T8 217 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 ATF6P18850 670 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 CACNA2D1P54289 1103 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 BCAT1P54687 386 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 SHC2P98077 582 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 CLEC16AQ2KHT3 1053 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 N4BP2L1Q5TBK1 243 aaPredicted RBP12.5□□□□□ -0.41
DDX39A-219ENST00000592927 TAF3Q5VWG9 929 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 ACAD10Q6JQN1 1059 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 CLEC20AQ6ZU45 233 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 DNAJB7Q7Z6W7 309 aaPredicted RBP12.5□□□□□ -0.41
DDX39A-219ENST00000592927 KIF18AQ8NI77 898 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 CTNNBL1Q8WYA6 563 aaPredicted RBP12.5□□□□□ -0.41
DDX39A-219ENST00000592927 TRIM11Q96F44 468 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 SPATA17Q96L03 361 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 KCNK16Q96T55 309 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 SMOQ99835 787 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 ZSWIM1Q9BR11 485 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 CORO1BQ9BR76 489 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 LACRTQ9GZZ8 138 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 CSNK1G1Q9HCP0 422 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 GMEB2Q9UKD1 530 aa12.5□□□□□ -0.41
DDX39A-219ENST00000592927 SLC38A8A6NNN8 435 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 M0QYV0 167 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 LILRB5O75023 590 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 BEST1O76090 585 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 CYP1A1P04798 512 aaPredicted RBP12.49□□□□□ -0.41
DDX39A-219ENST00000592927 SETSIPP0DME0 302 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 CSH1P0DML2 217 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 CSH2P0DML3 217 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 PTPN2P17706 415 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 GBP2P32456 591 aaPredicted RBP12.49□□□□□ -0.41
DDX39A-219ENST00000592927 GALCP54803 685 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 GNG11P61952 73 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 BST2Q10589 180 aaKnown RBP12.49□□□□□ -0.41
DDX39A-219ENST00000592927 TCEAL1Q15170 157 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 DENND5BQ6ZUT9 1274 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms