RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 PRR12Q9ULL5 1215 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 SPEF1Q9Y4P9 236 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 GOLGA8JA6NMD2 632 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 SNTNA6NMZ2 147 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 SIN3BO75182 1162 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 POLR2MP0CAP2 368 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 THRAP10827 490 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 RARGP13631 454 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 VAMP7P51809 220 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 HIRAP54198 1017 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 HEATR4Q86WZ0 1026 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 SPARTQ8N0X7 666 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 FAM172AQ8WUF8 416 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 C1orf54Q8WWF1 131 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 DHRS9Q9BPW9 319 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 GRHL1Q9NZI5 618 aa12.68□□□□□ -0.38
SMARCA4-217ENST00000591595 C2CD2LO14523 706 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 CYP26A1O43174 497 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 SGPL1O95470 568 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 DLATP10515 647 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 NAGAP17050 411 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 NR4A1P22736 598 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 DSTNP60981 165 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 B2MP61769 119 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 IFITM2Q01629 132 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 NLRX1Q86UT6 975 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 CPNE8Q86YQ8 564 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 ZNF564Q8TBZ8 553 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 RUNDC3BQ96NL0 473 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 OLFM1Q99784 485 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 AIFM2Q9BRQ8 373 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 C10orf88Q9H8K7 445 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 COL5A3P25940 1745 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 PFASO15067 1338 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 ATP8B3O60423 1300 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 CLOCKO15516 846 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 SULT1C4O75897 302 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 C6orf222P0C671 652 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 ZNF135P52742 658 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 ACTR3P61158 418 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 PPP2R2BQ00005 443 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 PSMD6Q15008 389 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 SGO2Q562F6 1265 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 CCBE1Q6UXH8 406 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 RNF19BQ6ZMZ0 732 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 SIAH1Q8IUQ4 282 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 MARVELD2Q8N4S9 558 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 GALNT6Q8NCL4 622 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 ICA1LQ8NDH6 482 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 BTBD9Q96Q07 612 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 PANX3Q96QZ0 392 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 FERD3LQ96RJ6 166 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 POP1Q99575 1024 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 CBWD1Q9BRT8 395 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 KIAA1586Q9HCI6 787 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 LRRC4BQ9NT99 713 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 APPL1Q9UKG1 709 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 GSTTP1A0A1W2PQM5 241 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 ANKRD63C9JTQ0 380 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 UBAP1LF5GYI3 381 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 PSMD11O00231 422 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 ENPP3O14638 875 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 CLDN3O15551 220 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 RSL1D1O76021 490 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 FKBP9O95302 570 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 PEX2P28328 305 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 COILP38432 576 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 DRG2P55039 364 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 NCKAP1LP55160 1127 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 PPP3CAQ08209 521 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 TLR1Q15399 786 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 STILQ15468 1287 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 NXNQ6DKJ4 435 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 PADI6Q6TGC4 694 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 ADGRG6Q86SQ4 1221 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 SAMD14Q8IZD0 417 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 GSDMBQ8TAX9 411 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 SGCDQ92629 289 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 PGBD4Q96DM1 585 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 CDH19Q9H159 772 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 TBK1Q9UHD2 729 aa12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 AGO2Q9UKV8 859 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-217ENST00000591595 CD48P09326 243 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 PTGIRP43119 386 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 CHRNEQ04844 493 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 SLC15A2Q16348 729 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 TRIM16LQ309B1 348 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 CEP55Q53EZ4 464 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 TMCO4Q5TGY1 634 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 RNF207Q6ZRF8 634 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 SLC13A5Q86YT5 568 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 GDPD5Q8WTR4 605 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 SDCCAG3Q96C92 435 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 SERPINB12Q96P63 405 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 IMPG2Q9BZV3 1241 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 ZNF696Q9H7X3 374 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 GPAMQ9HCL2 828 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 IGSF9Q9P2J2 1179 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 WRAP73Q9P2S5 460 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms