RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 MDH1BQ5I0G3 518 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 INTS6LQ5JSJ4 861 aaKnown RBP10.86□□□□□ -0.67
LIG3-203ENST00000585370 CLLU1OSQ5K130 101 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 ALS2CLQ60I27 953 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 DUPD1Q68J44 220 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 OVOS1Q6IE37 1185 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 AADACL2Q6P093 401 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 CD300LGQ6UXG3 332 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 PAQR9Q6ZVX9 377 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 ADAT2Q7Z6V5 191 aaKnown RBP10.86□□□□□ -0.67
LIG3-203ENST00000585370 PIGZQ86VD9 579 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 JAMLQ86YT9 394 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 SCUBE3Q8IX30 993 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 COLGALT2Q8IYK4 626 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 KRT222Q8N1A0 295 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 MREGQ8N565 214 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 KCTD6Q8NC69 237 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 C3orf58Q8NDZ4 430 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 CCHCR1Q8TD31 782 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 CASKIN2Q8WXE0 1202 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 CENPIQ92674 756 aaPredicted RBP10.86□□□□□ -0.67
LIG3-203ENST00000585370 RNF25Q96BH1 459 aaPredicted RBP10.86□□□□□ -0.67
LIG3-203ENST00000585370 LRRC45Q96CN5 670 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 FAM122AQ96E09 287 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 SMARCD1Q96GM5 515 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 TRIM62Q9BVG3 475 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 COLEC11Q9BWP8 271 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 OXCT2Q9BYC2 517 aaPredicted RBP10.86□□□□□ -0.67
LIG3-203ENST00000585370 B3GNT5Q9BYG0 378 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 DCLK3Q9C098 648 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 TSPYL1Q9H0U9 437 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 CSNK1G1Q9HCP0 422 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 PNPLA8Q9NP80 782 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 CRTAC1Q9NQ79 661 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 CNGB3Q9NQW8 809 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.86□□□□□ -0.67
LIG3-203ENST00000585370 TJP2Q9UDY2 1190 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 USP18Q9UMW8 372 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 NR2E1Q9Y466 385 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 PIEZO1Q92508 2521 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 hCG_1818297A0A087WSY0 165 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 LRRD1A4D1F6 860 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 TULP2O00295 520 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 ATP2C2O75185 946 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 AP1G2O75843 785 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 ENDOD1O94919 500 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 OAZ2O95190 189 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 ALDH2P05091 517 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 LCP1P13796 627 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 KDELR1P24390 212 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 ACAT1P24752 427 aaKnown RBP10.85□□□□□ -0.67
LIG3-203ENST00000585370 MATKP42679 507 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 CDKN2BP42772 138 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 TNNT3P45378 269 aaPredicted RBP10.85□□□□□ -0.67
LIG3-203ENST00000585370 CARSP49589 748 aaKnown RBP10.85□□□□□ -0.67
LIG3-203ENST00000585370 CAV1Q03135 178 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 DLX2Q07687 328 aaPredicted RBP10.85□□□□□ -0.67
LIG3-203ENST00000585370 HYAL1Q12794 435 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 TFDP2Q14188 446 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 HLTFQ14527 1009 aaKnown RBP eCLIP10.85□□□□□ -0.67
LIG3-203ENST00000585370 CCDC14Q49A88 953 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 SPDYCQ5MJ68 293 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 MFSD7Q6UXD7 560 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 C4orf50Q6ZRC1 276 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 EP400NLQ6ZTU2 488 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 CLEC20AQ6ZU45 233 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 STRADAQ7RTN6 431 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 FAM35AQ86V20 835 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 NPAS4Q8IUM7 802 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 PSTKQ8IV42 348 aaKnown RBP10.85□□□□□ -0.67
LIG3-203ENST00000585370 DCP1BQ8IZD4 617 aaKnown RBP10.85□□□□□ -0.67
LIG3-203ENST00000585370 SIX6OS1Q8N1H7 587 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 ARFGAP1Q8N6T3 406 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 EMC1Q8N766 993 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 BBOF1Q8ND07 529 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 IRGQQ8WZA9 623 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 TMEM175Q9BSA9 504 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 C11orf84Q9BUA3 381 aaPredicted RBP10.85□□□□□ -0.67
LIG3-203ENST00000585370 MAK16Q9BXY0 300 aaKnown RBP10.85□□□□□ -0.67
LIG3-203ENST00000585370 LMAN2LQ9H0V9 348 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 ALG13Q9NP73 1137 aaKnown RBP10.85□□□□□ -0.67
LIG3-203ENST00000585370 TBC1D13Q9NVG8 400 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 CLDND1Q9NY35 253 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 STAP1Q9ULZ2 295 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 NFU1Q9UMS0 254 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 RWDD3Q9Y3V2 267 aa10.85□□□□□ -0.67
LIG3-203ENST00000585370 ARIH1Q9Y4X5 557 aaPredicted RBP10.85□□□□□ -0.67
LIG3-203ENST00000585370 ATG2AQ2TAZ0 1938 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 TCRBV7S2A1N4TA0A589 114 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 MYBPHLA2RUH7 354 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 MDM4O15151 490 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 HCRTO43612 131 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 TADA2AO75478 443 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 DAB1O75553 588 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 GABBR2O75899 941 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 ITIH2P19823 946 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 DNAJB1P25685 340 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 TKTP29401 623 aaKnown RBP10.84□□□□□ -0.67
LIG3-203ENST00000585370 NOS2P35228 1153 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 GJC1P36383 396 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms