RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SERINC3Q13530 473 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 ZNF268Q14587 947 aaPredicted RBP11.85□□□□□ -0.51
CCDC47-206ENST00000584112 ITPRIPL2Q3MIP1 535 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 WDR72Q3MJ13 1102 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 SDHAF4Q5VUM1 108 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 TXNDC8Q6A555 127 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 FSTL4Q6MZW2 842 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 SYT12Q8IV01 421 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 SLC9A9Q8IVB4 645 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 KIAA0895Q8NCT3 520 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 MYCBPAPQ8TBZ2 947 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 TMEM174Q8WUU8 243 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 MYLPFQ96A32 169 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 SYAP1Q96A49 352 aaPredicted RBP11.85□□□□□ -0.51
CCDC47-206ENST00000584112 SPATA17Q96L03 361 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 LRRC3BQ96PB8 259 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 EHD2Q9NZN4 543 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 HPSEQ9Y251 543 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 TRAV19A0A0A6YYK7 116 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 GOLGA8CPA6NN73 597 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 PDXKO00764 312 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 TRIM66O15016 1216 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 HCRTO43612 131 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 CLSTN1O94985 981 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 CST3P01034 146 aaPredicted RBP11.84□□□□□ -0.51
CCDC47-206ENST00000584112 PDGFRBP09619 1106 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 USP17L7P0C7H9 530 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 LMO2P25791 158 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 GNL1P36915 607 aaPredicted RBP11.84□□□□□ -0.51
CCDC47-206ENST00000584112 GRIK1P39086 918 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 PDE6CP51160 858 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 AMPD2Q01433 879 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 CYP27A1Q02318 531 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 TLE3Q04726 772 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 TNK2Q07912 1038 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 STK4Q13043 487 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 BIRC3Q13489 604 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 KMT5BQ4FZB7 885 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 CC2D1AQ6P1N0 951 aaPredicted RBP11.84□□□□□ -0.51
CCDC47-206ENST00000584112 STKLD1Q8NE28 680 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 OR6B3Q8NGW1 331 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 USP13Q92995 863 aaPredicted RBP11.84□□□□□ -0.51
CCDC47-206ENST00000584112 SCAND2PQ9GZW5 306 aaPredicted RBP11.84□□□□□ -0.51
CCDC47-206ENST00000584112 SMG9Q9H0W8 520 aaKnown RBP11.84□□□□□ -0.51
CCDC47-206ENST00000584112 CRTAC1Q9NQ79 661 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 GKN1Q9NS71 199 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 TOR4AQ9NXH8 423 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 EBF1Q9UH73 591 aa11.84□□□□□ -0.51
CCDC47-206ENST00000584112 FAM237AA0A1B0GTK4 181 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 CALUO43852 315 aaPredicted RBP11.83□□□□□ -0.52
CCDC47-206ENST00000584112 ATG13O75143 517 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 TADA3O75528 432 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 CKMP06732 381 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 ATXN1LP0C7T5 689 aaKnown RBP11.83□□□□□ -0.52
CCDC47-206ENST00000584112 PFKLP17858 780 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 BDNFP23560 247 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 ITPKAP23677 461 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 MYL6P60660 151 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 NFKB2Q00653 900 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 RHDQ02161 417 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 FAM160A1Q05DH4 1040 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 CCDC173Q0VFZ6 552 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 KCNB1Q14721 858 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 PDGFRLQ15198 375 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 CCDC142Q17RM4 750 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 USP39Q53GS9 565 aaKnown RBP11.83□□□□□ -0.52
CCDC47-206ENST00000584112 MDH1BQ5I0G3 518 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 DENND5BQ6ZUT9 1274 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 FRMD1Q8N878 549 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 PARD3BQ8TEW8 1205 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 WHAMMQ8TF30 809 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 ZNF516Q92618 1163 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 EXOC4Q96A65 974 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 MED8Q96G25 268 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 CCDC34Q96HJ3 373 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 PCED1BQ96HM7 432 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 FAM83CQ9BQN1 747 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 MRPL45Q9BRJ2 306 aaKnown RBP11.83□□□□□ -0.52
CCDC47-206ENST00000584112 ELOVL4Q9GZR5 314 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 GZF1Q9H116 711 aaPredicted RBP11.83□□□□□ -0.52
CCDC47-206ENST00000584112 KCTD10Q9H3F6 313 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 VRTNQ9H8Y1 702 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 TRPC7Q9HCX4 862 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 DNAAF2Q9NVR5 837 aaKnown RBP11.83□□□□□ -0.52
CCDC47-206ENST00000584112 DMAC2Q9NW81 257 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 KIAA1522Q9P206 1035 aaPredicted RBP11.83□□□□□ -0.52
CCDC47-206ENST00000584112 SLC6A14Q9UN76 642 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 CCL26Q9Y258 94 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 ZDHHC9Q9Y397 364 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 CEP192Q8TEP8 1941 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 ATP8B3O60423 1300 aa11.83□□□□□ -0.52
CCDC47-206ENST00000584112 F8P00451 2351 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 A0A1W2PQ27 194 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 A0A1W2PQ64 194 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 A0A1W2PQD8 194 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 LRRIQ3A6PVS8 624 aaPredicted RBP11.82□□□□□ -0.52
CCDC47-206ENST00000584112 A8MXQ7 604 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 CBFA2T3O75081 653 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 EGFP01133 1207 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 NR3C1P04150 777 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms