RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 CACNA1EQ15878 2313 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 VPS37CA5D8V6 355 aaPredicted RBP8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 CDX4O14627 284 aaPredicted RBP8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 KHNYNO15037 678 aaKnown RBP8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 GRIK1P39086 918 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 CYP27A1Q02318 531 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 MESP2Q0VG99 397 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 IFRD2Q12894 506 aaPredicted RBP8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 CRY1Q16526 586 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 DAB2IPQ5VWQ8 1189 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 RRAGBQ5VZM2 374 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 ERICH6BQ5W0A0 696 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 C4orf50Q6ZRC1 276 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 DENND5BQ6ZUT9 1274 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 SV2BQ7L1I2 683 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 ARMCX6Q7L4S7 300 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 FILIP1Q7Z7B0 1213 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 C12orf40Q86WS4 652 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 GPD1LQ8N335 351 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 FRMD1Q8N878 549 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 GLIS3Q8NEA6 775 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 RLN3Q8WXF3 142 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 PIGKQ92643 395 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 PCED1BQ96HM7 432 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 HPDLQ96IR7 371 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 ANKRD36BP1Q96IX9 119 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 ZDHHC4Q9NPG8 344 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 TMEM9BQ9NQ34 198 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 OLFML3Q9NRN5 406 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 INTS13Q9NVM9 706 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 SMPD4Q9NXE4 827 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 TRPM5Q9NZQ8 1165 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 MAGEC2Q9UBF1 373 aaPredicted RBP8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 CDH9Q9ULB4 789 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 NME7Q9Y5B8 376 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 CPQQ9Y646 472 aa8.31□□□□□ -1.08
SMCHD1-210ENST00000583800 ATXN2Q99700 1313 aaKnown RBP8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 PCDH15Q96QU1 1955 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 A0A087X0B3 334 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 FRMD3A2A2Y4 597 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 F8VP50 259 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 SGK1O00141 431 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 KLF8O95600 359 aaPredicted RBP8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 OLFM2O95897 454 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 TNNC2P02585 160 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 PDGFRBP09619 1106 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 WARSP23381 471 aaKnown RBP8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 ANXA13P27216 316 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 TXLNAP40222 546 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 STAT6P42226 847 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 MAPK8P45983 427 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 SLC6A11P48066 632 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 PDE6CP51160 858 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 CACNA2D1P54289 1103 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 IRX4P78413 519 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 SLC7A9P82251 487 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 CEBPZQ03701 1054 aaKnown RBP8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 KDSRQ06136 332 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 MYO1EQ12965 1108 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 DHCR24Q15392 516 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 UAP1L1Q3KQV9 507 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 MDH1BQ5I0G3 518 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 KIAA1211LQ6NV74 962 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 FAM173BQ6P4H8 233 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 VSTM1Q6UX27 236 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 LIMS2Q7Z4I7 341 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 C11orf74Q86VG3 221 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 CBWD2Q8IUF1 395 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 ALLCQ8N6M5 410 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 TXNDC5Q8NBS9 432 aaKnown RBP8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 DEFB124Q8NES8 71 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 CCDC26Q8TAB7 109 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 OLIG1Q8TAK6 271 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 HPS3Q969F9 1004 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 SPATA17Q96L03 361 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 MMS19Q96T76 1030 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 MRPL45Q9BRJ2 306 aaKnown RBP8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 PANK2Q9BZ23 570 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 RNF38Q9H0F5 515 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 TMEM30AQ9NV96 361 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 PANK4Q9NVE7 773 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 VTI1BQ9UEU0 232 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 WASF3Q9UPY6 502 aa8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 R3HCC1Q9Y3T6 440 aaKnown RBP8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 SRPRBQ9Y5M8 271 aaKnown RBP8.3□□□□□ -1.08
SMCHD1-210ENST00000583800 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 ZNF840PA6NDX5 716 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 ESPNB1AK53 854 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 RNF225M0QZC1 329 aaPredicted RBP8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 FZD6O60353 706 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 KAT7O95251 611 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 OAS1P00973 400 aaKnown RBP8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 MBL2P11226 248 aaPredicted RBP8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 PFKLP17858 780 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 CSRP1P21291 193 aaKnown RBP8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 P2RY2P41231 377 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 PTGER3P43115 390 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms