RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 LILRA6Q6PI73 481 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 UBALD2Q8IYN6 164 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 KREMEN2Q8NCW0 462 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 JOSD2Q8TAC2 188 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 ACTRT1Q8TDG2 376 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 RIN2Q8WYP3 895 aaPredicted RBP13.19□□□□□ -0.3
SRSF1-204ENST00000581979 RTP3Q9BQQ7 232 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 DUSP16Q9BY84 665 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 B3GNT5Q9BYG0 378 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 CARD9Q9H257 536 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 PLEKHA4Q9H4M7 779 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 SORCS3Q9UPU3 1222 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 PCDHA3Q9Y5H8 950 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 MTCL1Q9Y4B5 1905 aaKnown RBP13.18□□□□□ -0.3
SRSF1-204ENST00000581979 CCDC195A0A1B0GUA6 201 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 MYBPHLA2RUH7 354 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 PGRMC1O00264 195 aaKnown RBP13.18□□□□□ -0.3
SRSF1-204ENST00000581979 XPO1O14980 1071 aaKnown RBP13.18□□□□□ -0.3
SRSF1-204ENST00000581979 FAM200BP0CF97 657 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 LCP1P13796 627 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 NPR3P17342 541 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 PSMA2P25787 234 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 RFC1P35251 1148 aaPredicted RBP13.18□□□□□ -0.3
SRSF1-204ENST00000581979 ACADSBP45954 432 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 MARCKSL1P49006 195 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 RWDD2BP57060 319 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 OGDHQ02218 1023 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 YWHAHQ04917 246 aaPredicted RBP13.18□□□□□ -0.3
SRSF1-204ENST00000581979 ELAVL2Q12926 359 aaKnown RBP13.18□□□□□ -0.3
SRSF1-204ENST00000581979 ZNF211Q13398 564 aaPredicted RBP13.18□□□□□ -0.3
SRSF1-204ENST00000581979 MTMR3Q13615 1198 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 PIGHQ14442 188 aaPredicted RBP13.18□□□□□ -0.3
SRSF1-204ENST00000581979 INTS6LQ5JSJ4 861 aaKnown RBP13.18□□□□□ -0.3
SRSF1-204ENST00000581979 SEL1L2Q5TEA6 688 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 CCDC149Q6ZUS6 474 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 OTOP3Q7RTS5 596 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 ZNF572Q7Z3I7 529 aaPredicted RBP13.18□□□□□ -0.3
SRSF1-204ENST00000581979 TMEM110Q86TL2 294 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 FAM35AQ86V20 835 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 ZDHHC17Q8IUH5 632 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 MYCBPAPQ8TBZ2 947 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 ALG3Q92685 438 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 TTPALQ9BTX7 342 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 CYLDQ9NQC7 956 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.18□□□□□ -0.3
SRSF1-204ENST00000581979 ZDBF2Q9HCK1 2354 aa13.18□□□□□ -0.3
SRSF1-204ENST00000581979 TGM5O43548 720 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 PLA2G4AP47712 749 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 PEX5P50542 639 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 CDR1P51861 262 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 TSPY1Q01534 308 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 SLC6A3Q01959 620 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 ZNF252P-AS1Q0IIN9 211 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 DCAF12L1Q5VU92 463 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 FAM171A1Q5VUB5 890 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 DAB2IPQ5VWQ8 1189 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 CC2D1AQ6P1N0 951 aaPredicted RBP13.17□□□□□ -0.3
SRSF1-204ENST00000581979 PAQR9Q6ZVX9 377 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 RHOT1Q8IXI2 618 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 RASGEF1CQ8N431 466 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 FBXL6Q8N531 539 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 EMC1Q8N766 993 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 SPATA4Q8NEY3 305 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 PIK3R5Q8WYR1 880 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 MYLPFQ96A32 169 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 ACSF2Q96CM8 615 aaPredicted RBP13.17□□□□□ -0.3
SRSF1-204ENST00000581979 PCED1BQ96HM7 432 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 HSFY1Q96LI6 401 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 KRT82Q9NSB4 513 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 ZDHHC7Q9NXF8 308 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 LIMD1Q9UGP4 676 aa13.17□□□□□ -0.3
SRSF1-204ENST00000581979 PSTPIP1O43586 416 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 RFPL2O75678 378 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 AP1G2O75843 785 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 RPL17P18621 184 aaKnown RBP13.16□□□□□ -0.3
SRSF1-204ENST00000581979 HOXD11P31277 338 aaPredicted RBP13.16□□□□□ -0.3
SRSF1-204ENST00000581979 GJC1P36383 396 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 MAP3K7CLP57077 242 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 MAPRE1Q15691 268 aaKnown RBP13.16□□□□□ -0.3
SRSF1-204ENST00000581979 PRSS55Q6UWB4 352 aaPredicted RBP13.16□□□□□ -0.3
SRSF1-204ENST00000581979 OLFML1Q6UWY5 402 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 CLEC20AQ6ZU45 233 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 PIGZQ86VD9 579 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 SCUBE3Q8IX30 993 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 NOA1Q8NC60 698 aaKnown RBP13.16□□□□□ -0.3
SRSF1-204ENST00000581979 OR10T2Q8NGX3 314 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 FNIP1Q8TF40 1166 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 ZNF707Q96C28 371 aaPredicted RBP13.16□□□□□ -0.3
SRSF1-204ENST00000581979 CLSTN3Q9BQT9 956 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 WDR6Q9NNW5 1121 aaKnown RBP13.16□□□□□ -0.3
SRSF1-204ENST00000581979 F8VP50 259 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 SYN3O14994 580 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 PAPSS1O43252 624 aaPredicted RBP13.16□□□□□ -0.3
SRSF1-204ENST00000581979 BEST1O76090 585 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 FGGP02679 453 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 ASGR2P07307 311 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 SPATA31D3P0C874 917 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 GPD1P21695 349 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 FGFR3P22607 806 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 RPL34P49207 117 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms