RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 FYNP06241 537 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SPATA31D3P0C874 917 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 NCAM1P13591 858 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TFE3P19532 575 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 KLRC2P26717 231 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 YWHAQP27348 245 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 BMP8BP34820 402 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ALDH1A3P47895 512 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SULT1E1P49888 294 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 PEX5P50542 639 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 RWDD2BP57060 319 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 YWHAGP61981 247 aaKnown RBP eCLIP14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SYPL2Q5VXT5 272 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 PPP2R2DQ66LE6 453 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SPATA31D4Q6ZUB0 917 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 EDEM1Q92611 657 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 FBXO32Q969P5 355 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TRIM62Q9BVG3 475 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 COMMD8Q9NX08 183 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 STAP1Q9ULZ2 295 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 MYO16Q9Y6X6 1858 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 H3BNC9 293 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 H2AFXP16104 143 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 MIPP30301 263 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 PCK1P35558 622 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 IRS1P35568 1242 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CAMK1Q14012 370 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 HADHQ16836 314 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 WHAMMP3Q1A5X7 153 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SLC25A52Q3SY17 297 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 RAB6CQ53S08 254 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 LRRC38Q5VT99 294 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 DCAF12L1Q5VU92 463 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 BTBD8Q5XKL5 378 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 FBXO38Q6PIJ6 1188 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SCD5Q86SK9 330 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 MON1AQ86VX9 555 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TDHQ8IZJ6 230 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TBCBQ99426 244 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 RAB6CQ9H0N0 254 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 GMIPQ9P107 970 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 PCSK1NQ9UHG2 260 aa14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 MAGED2Q9UNF1 606 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-219ENST00000580670 A0A1W2PQH9 124 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 FAM92AA1XBS5 289 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 CES2O00748 559 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 CEP104O60308 925 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 PGFP49763 221 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 SLC25A11Q02978 314 aaKnown RBP14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 TWF1Q12792 350 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 TAF10Q12962 218 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 ZNF211Q13398 564 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 VEPH1Q14D04 833 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 ZFYVE27Q5T4F4 411 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 ZNF771Q7L3S4 317 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 CREG2Q8IUH2 290 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 ARHGAP18Q8N392 663 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 CENPIQ92674 756 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 NT5C3BQ969T7 300 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 MS4A14Q96JA4 679 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 NPY6RQ99463 290 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 NCAPGQ9BPX3 1015 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 ADAM33Q9BZ11 813 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 CARD9Q9H257 536 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 ZWILCHQ9H900 591 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 NMUR1Q9HB89 426 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 ABCC13Q9NSE7 274 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 USP18Q9UMW8 372 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 INSL5Q9Y5Q6 135 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 CHD9Q3L8U1 2897 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 GREB1Q4ZG55 1949 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 PLXNA3P51805 1871 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 M0QYT0 321 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 PRPSAP2O60256 369 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 GLUD1P00367 558 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 KRT7P08729 469 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 CSH1P0DML2 217 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 CSH2P0DML3 217 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 IL1R2P27930 398 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 HDAC4P56524 1084 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 PITX1P78337 314 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 TAF12Q16514 161 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 CCDC181Q5TID7 509 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 TXNRD3NBQ6F5E7 133 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 PDE12Q6L8Q7 609 aaKnown RBP14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 SCYL2Q6P3W7 929 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 LILRA6Q6PI73 481 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 BEND5Q7L4P6 421 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 STRADAQ7RTN6 431 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 KATNAL2Q8IYT4 538 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 SLC7A14Q8TBB6 771 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 ARNTL2Q8WYA1 636 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 TTLL2Q9BWV7 592 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 SLC28A3Q9HAS3 691 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 KLHL11Q9NVR0 708 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 RRN3Q9NYV6 651 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 EHD2Q9NZN4 543 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 FBXW11Q9UKB1 542 aa14.45□□□□□ -0.1
CDK5RAP3-219ENST00000580670 ZNF638Q14966 1978 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-219ENST00000580670 SYNJ2BP-COX16A0A087WUM0 186 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms