RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 CNKSR3Q6P9H4 555 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 SPATA2LQ8IUW3 424 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-218ENST00000578469 MAP7D3Q8IWC1 876 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 GSPT2Q8IYD1 628 aaKnown RBP17.7■□□□□ 0.42
SREBF1-218ENST00000578469 DCP1BQ8IZD4 617 aaKnown RBP17.7■□□□□ 0.42
SREBF1-218ENST00000578469 CMASQ8NFW8 434 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-218ENST00000578469 TEKT4Q8WW24 435 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 C1orf54Q8WWF1 131 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 FAM149B1Q96BN6 582 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 SMOQ99835 787 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 DDX23Q9BUQ8 820 aaKnown RBP17.7■□□□□ 0.42
SREBF1-218ENST00000578469 FRMD8P1Q9BZ68 369 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-218ENST00000578469 CNGB3Q9NQW8 809 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 NFU1Q9UMS0 254 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 FAN1Q9Y2M0 1017 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.69■□□□□ 0.42
SREBF1-218ENST00000578469 ESYT3A0FGR9 886 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 ZSCAN5CA6NGD5 496 aaPredicted RBP17.69■□□□□ 0.42
SREBF1-218ENST00000578469 NRP1O14786 923 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 B4GALT3O60512 393 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 OAZ2O95190 189 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 GAS8O95995 478 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 MYBL2P10244 700 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 IL1R2P27930 398 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 HOXD11P31277 338 aaPredicted RBP17.69■□□□□ 0.42
SREBF1-218ENST00000578469 MATKP42679 507 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 DRG2P55039 364 aaKnown RBP17.69■□□□□ 0.42
SREBF1-218ENST00000578469 YWHAZP63104 245 aaKnown RBP17.69■□□□□ 0.42
SREBF1-218ENST00000578469 ADCY1Q08828 1119 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 ELAVL2Q12926 359 aaKnown RBP17.69■□□□□ 0.42
SREBF1-218ENST00000578469 GPS2Q13227 327 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 SNX1Q13596 522 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 PDK2Q15119 407 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 PPP1R7Q15435 360 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 SMTNL2Q2TAL5 461 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 KCNT1Q5JUK3 1230 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 TTC27Q6P3X3 843 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 SND1Q7KZF4 910 aaKnown RBP eCLIP17.69■□□□□ 0.428e-7■■■□□ 16.7
SREBF1-218ENST00000578469 STRADAQ7RTN6 431 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 TTC13Q8NBP0 860 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 ATL2Q8NHH9 583 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 CLEC4CQ8WTT0 213 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 SEC14L1Q92503 715 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 HSPH1Q92598 858 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 SLCO2A1Q92959 643 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 CAVIN3Q969G5 261 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 ACSF2Q96CM8 615 aaPredicted RBP17.69■□□□□ 0.42
SREBF1-218ENST00000578469 PKMYT1Q99640 499 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 LRFN3Q9BTN0 628 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 ZBED2Q9BTP6 218 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 CSNK1G1Q9HCP0 422 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 DMAP1Q9NPF5 467 aaPredicted RBP17.69■□□□□ 0.42
SREBF1-218ENST00000578469 DNAJB4Q9UDY4 337 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 STAP1Q9ULZ2 295 aa17.69■□□□□ 0.42
SREBF1-218ENST00000578469 COL4A4P53420 1690 aaPredicted RBP17.68■□□□□ 0.42
SREBF1-218ENST00000578469 TBKBP1A7MCY6 615 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 MAP2K7O14733 419 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 DAPK3O43293 454 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 KRT10P13645 584 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 NOS2P35228 1153 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 KRT81Q14533 505 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 TAZQ16635 292 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 TCTN1Q2MV58 587 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 DUPD1Q68J44 220 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 OR10T2Q8NGX3 314 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 CENPIQ92674 756 aaPredicted RBP17.68■□□□□ 0.42
SREBF1-218ENST00000578469 HERPUD2Q9BSE4 406 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 TRIM51Q9BSJ1 452 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 MAK16Q9BXY0 300 aaKnown RBP17.68■□□□□ 0.42
SREBF1-218ENST00000578469 ULBP1Q9BZM6 244 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 DPH5Q9H2P9 285 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 VIPAS39Q9H9C1 493 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 PNPLA8Q9NP80 782 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 CHST7Q9NS84 486 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 OGFRQ9NZT2 677 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 ADAM28Q9UKQ2 775 aa17.68■□□□□ 0.42
SREBF1-218ENST00000578469 C3orf70A6NLC5 250 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-218ENST00000578469 F8W810 466 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 BDNFP23560 247 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 KCNJ1P48048 391 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 GATMP50440 423 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 DAOAP59103 153 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 TFDP2Q14188 446 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 NFE2Q16621 373 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-218ENST00000578469 SLC25A52Q3SY17 297 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 RAB41Q5JT25 222 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 SH3PXD2AQ5TCZ1 1133 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 DRICH1Q6PGQ1 229 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-218ENST00000578469 RFX6Q8HWS3 928 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 DEFB106AQ8N104 65 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 LRRC43Q8N309 656 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 ZMIZ2Q8NF64 920 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 ATG4AQ8WYN0 398 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 IRGQQ8WZA9 623 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 CCDC114Q96M63 670 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 TRIM62Q9BVG3 475 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 CALN1Q9BXU9 219 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 ZCWPW1Q9H0M4 648 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 EPHX3Q9H6B9 360 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 POPDC2Q9HBU9 364 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms