RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 LMAN1LQ9HAT1 526 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 FBXO2Q9UK22 296 aaPredicted RBP6.72□□□□□ -1.33
NUP88-212ENST00000576708 RAXQ9Y2V3 346 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.72□□□□□ -1.33
NUP88-212ENST00000576708 MIA3Q5JRA6 1907 aa6.72□□□□□ -1.33
NUP88-212ENST00000576708 PATJQ8NI35 1801 aa6.71□□□□□ -1.33
NUP88-212ENST00000576708 COL4A2P08572 1712 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 A0A087X0B3 334 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.71□□□□□ -1.34
NUP88-212ENST00000576708 FAM95CA0A1B0GW59 222 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 ANO9A1A5B4 782 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 GOLGA8IPA6NC78 632 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 MYMKA6NI61 221 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 GOLGA8JA6NMD2 632 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 SLC38A8A6NNN8 435 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 ARNTLO00327 626 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 CYB561D2O14569 222 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 ZNF263O14978 683 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 SLC26A4O43511 780 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 XPOTO43592 962 aaKnown RBP6.71□□□□□ -1.34
NUP88-212ENST00000576708 KINO60870 393 aaKnown RBP6.71□□□□□ -1.34
NUP88-212ENST00000576708 ODC1P11926 461 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 PSMC3P17980 439 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 TYMPP19971 482 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 ADSSP30520 456 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 NTF4P34130 210 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 ALDH1A3P47895 512 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 GPR15P49685 360 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 MCM2P49736 904 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 CASP5P51878 434 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 EPHB3P54753 998 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 ETF1P62495 437 aaKnown RBP6.71□□□□□ -1.34
NUP88-212ENST00000576708 CYP4F8P98187 520 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 RING1Q06587 406 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 DMWDQ09019 674 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 RESTQ13127 1097 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 CUL4AQ13619 759 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 MYBPC2Q14324 1141 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 LPAL2Q16609 132 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 KYAT1Q16773 422 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 SLC39A12Q504Y0 691 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 ZBTB37Q5TC79 503 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 WSCD1Q658N2 575 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 ARMCX5Q6P1M9 558 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 GAREM2Q75VX8 874 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 ZNF720Q7Z2F6 126 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 BRAPQ7Z569 592 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 LRRTM3Q86VH5 581 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 ARID3BQ8IVW6 561 aaPredicted RBP6.71□□□□□ -1.34
NUP88-212ENST00000576708 MFSD6LQ8IWD5 586 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 SMYD4Q8IYR2 804 aaPredicted RBP6.71□□□□□ -1.34
NUP88-212ENST00000576708 FAM3CQ92520 227 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 RUBCNQ92622 972 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 DNASE1L2Q92874 299 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 KCNN1Q92952 543 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 ISL2Q96A47 359 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 DNAJC19Q96DA6 116 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 SAAL1Q96ER3 474 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 BORCS6Q96GS4 357 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 NELL2Q99435 816 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 SEPT5Q99719 369 aaPredicted RBP6.71□□□□□ -1.34
NUP88-212ENST00000576708 PYM1Q9BRP8 204 aaKnown RBP6.71□□□□□ -1.34
NUP88-212ENST00000576708 FAM213AQ9BRX8 229 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 CCSER1Q9C0I3 900 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 SEMA4AQ9H3S1 761 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 ACSS3Q9H6R3 686 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 C7orf69Q9H7B7 122 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 UPF2Q9HAU5 1272 aaKnown RBP6.71□□□□□ -1.34
NUP88-212ENST00000576708 TRPV4Q9HBA0 871 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 RBM12Q9NTZ6 932 aaKnown RBP6.71□□□□□ -1.34
NUP88-212ENST00000576708 TMLHEQ9NVH6 421 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 C2orf42Q9NWW7 574 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 DPP3Q9NY33 737 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 STOML1Q9UBI4 398 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 FBXO4Q9UKT5 387 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 AGO2Q9UKV8 859 aaKnown RBP6.71□□□□□ -1.34
NUP88-212ENST00000576708 CORINQ9Y5Q5 1042 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 PIAS3Q9Y6X2 628 aa6.71□□□□□ -1.34
NUP88-212ENST00000576708 TICRRQ7Z2Z1 1910 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 KRTAP9-6A0A140TA67 174 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 MED19A0JLT2 244 aaPredicted RBP6.7□□□□□ -1.34
NUP88-212ENST00000576708 NCAM2O15394 837 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 HCRTO43612 131 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 PRAMEF12O95522 483 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 BMP15O95972 392 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 CHRNB1P11230 501 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 TDGF1P13385 188 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 ATF6P18850 670 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 SYT1P21579 422 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 GABRR2P28476 465 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 RPS9P46781 194 aaKnown RBP6.7□□□□□ -1.34
NUP88-212ENST00000576708 TAF6P49848 677 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 SATB1Q01826 763 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 TNK2Q07912 1038 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 SRSF5Q13243 272 aaKnown RBP6.7□□□□□ -1.34
NUP88-212ENST00000576708 PLD1Q13393 1074 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 CCDC142Q17RM4 750 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 ZNF528Q3MIS6 628 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 MGAT5BQ3V5L5 792 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 NKAPLQ5M9Q1 402 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms