RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 TMEM92Q6UXU6 159 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 TPGS1Q6ZTW0 290 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 CEP68Q76N32 757 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 SYT13Q7L8C5 426 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 DDX42Q86XP3 938 aaKnown RBP eCLIP12.52□□□□□ -0.41
LITAF-219ENST00000576334 MIB1Q86YT6 1006 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 ARHGEF19Q8IW93 802 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 ELOA2Q8IYF1 753 aaPredicted RBP12.52□□□□□ -0.41
LITAF-219ENST00000576334 ALLCQ8N6M5 410 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 LMO3Q8TAP4 145 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 TFAP2BQ92481 460 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 MED15Q96RN5 788 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 PNKPQ96T60 521 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 ZSWIM1Q9BR11 485 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 TPSD1Q9BZJ3 242 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 SMOC1Q9H4F8 434 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 ARHGEF4Q9NR80 690 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 SPHK2Q9NRA0 654 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 HOOK1Q9UJC3 728 aaKnown RBP12.52□□□□□ -0.41
LITAF-219ENST00000576334 GMEB2Q9UKD1 530 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 HCN2Q9UL51 889 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 RAB23Q9ULC3 237 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 USP3Q9Y6I4 520 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 MYO18AQ92614 2054 aaKnown RBP12.52□□□□□ -0.41
LITAF-219ENST00000576334 SGK1O00141 431 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 GDF9O60383 454 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 TULP3O75386 442 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 GABBR2O75899 941 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 KLF8O95600 359 aaPredicted RBP12.51□□□□□ -0.41
LITAF-219ENST00000576334 ADH1CP00326 375 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 KLKB1P03952 638 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 CD19P15391 556 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 HOXA6P31267 233 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 EFEMP1Q12805 493 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 FBXO43Q4G163 708 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 ARHGAP17Q68EM7 881 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 LAIR1Q6GTX8 287 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 HTR3DQ70Z44 454 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 RRAGAQ7L523 313 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 BHLHA9Q7RTU4 235 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 CCDC186Q7Z3E2 898 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.51□□□□□ -0.41
LITAF-219ENST00000576334 ETFBKMTQ8IXQ9 262 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 FRMD1Q8N878 549 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 ANKRD52Q8NB46 1076 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 GAB3Q8WWW8 586 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 CEP63Q96MT8 703 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 SRRTQ9BXP5 876 aaKnown RBP12.51□□□□□ -0.41
LITAF-219ENST00000576334 ULBP1Q9BZM6 244 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 PNPLA8Q9NP80 782 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 PLK2Q9NYY3 685 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 TBC1D14Q9P2M4 693 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 RASAL2Q9UJF2 1139 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 TSPAN16Q9UKR8 245 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 SPAG17Q6Q759 2223 aa12.51□□□□□ -0.41
LITAF-219ENST00000576334 ABCA7Q8IZY2 2146 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 NEDD8-MDP1E9PL57 170 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 ADAM23O75077 832 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 RPP40O75818 363 aaKnown RBP12.5□□□□□ -0.41
LITAF-219ENST00000576334 STC2O76061 302 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 CCDC192P0DO97 292 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 WASP42768 502 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 KIR2DL1P43626 348 aaPredicted RBP12.5□□□□□ -0.41
LITAF-219ENST00000576334 TKTL1P51854 596 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 DGKEP52429 567 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 APBA1Q02410 837 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 GAD2Q05329 585 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 RAB41Q5JT25 222 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 ANO7Q6IWH7 933 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 TMEM270Q6UE05 265 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 TOGARAM2Q6ZUX3 1019 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 TRIM59Q8IWR1 403 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 PPM1KQ8N3J5 372 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 IL17RCQ8NAC3 791 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 TXNDC5Q8NBS9 432 aaKnown RBP12.5□□□□□ -0.41
LITAF-219ENST00000576334 ARRDC1-AS1Q9H2J1 176 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 RXFP3Q9NSD7 469 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 MMP17Q9ULZ9 603 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 PCDHB4Q9Y5E5 795 aa12.5□□□□□ -0.41
LITAF-219ENST00000576334 O00370 1275 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 HOXC11O43248 304 aaPredicted RBP12.49□□□□□ -0.41
LITAF-219ENST00000576334 APBB3O95704 486 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 APODP05090 189 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 RETP07949 1114 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 TYRP14679 529 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 TRIM21P19474 475 aaKnown RBP12.49□□□□□ -0.41
LITAF-219ENST00000576334 BRD2P25440 801 aaKnown RBP12.49□□□□□ -0.41
LITAF-219ENST00000576334 CNR2P34972 360 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 RGS7P49802 495 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 YWHAGP61981 247 aaKnown RBP eCLIP12.49□□□□□ -0.41
LITAF-219ENST00000576334 ADIGQ0VDE8 80 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 KCNH2Q12809 1159 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 PAK1Q13153 545 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 SF3A2Q15428 464 aaKnown RBP12.49□□□□□ -0.41
LITAF-219ENST00000576334 CRY1Q16526 586 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 SGO2Q562F6 1265 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 Q6ZNB5 142 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 CAMKK1Q8N5S9 505 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 MDGA1Q8NFP4 955 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 TSTD1Q8NFU3 115 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms