RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 ZNF148Q9UQR1 794 aa29.66■■■□□ 2.34
CTDNEP1-210ENST00000574322 KRT14P02533 472 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 IL4RP24394 825 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 GABPB1Q06547 395 aaPredicted RBP29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 SCYL2Q6P3W7 929 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 RFX6Q8HWS3 928 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 CRIPAKQ8N1N5 446 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 OR10T2Q8NGX3 314 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 FAF2Q96CS3 445 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 PKNOX2Q96KN3 472 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 RNF157Q96PX1 679 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 RUFY1Q96T51 708 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 NPY6RQ99463 290 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 PCDH18Q9HCL0 1135 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 PNPLA8Q9NP80 782 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 H0YGN5 161 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 NDUFV1P49821 464 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 DAOAP59103 153 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 OTUD4Q01804 1114 aaKnown RBP29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 DPYSL2Q16555 572 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 PSTKQ8IV42 348 aaKnown RBP29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 KCNK16Q96T55 309 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 ZNF670Q9BS34 389 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 TSPYL1Q9H0U9 437 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 ZMYND8Q9ULU4 1186 aaPredicted RBP29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 PCDHB7Q9Y5E2 793 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 NFS1Q9Y697 457 aa29.65■■■□□ 2.34
CTDNEP1-210ENST00000574322 TANC1Q9C0D5 1861 aa29.64■■■□□ 2.34
CTDNEP1-210ENST00000574322 F8W810 466 aa29.64■■■□□ 2.34
CTDNEP1-210ENST00000574322 OAZ2O95190 189 aa29.64■■■□□ 2.34
CTDNEP1-210ENST00000574322 CXCL10P02778 98 aa29.64■■■□□ 2.34
CTDNEP1-210ENST00000574322 SYN1P17600 705 aa29.64■■■□□ 2.34
CTDNEP1-210ENST00000574322 ADCY8P40145 1251 aa29.64■■■□□ 2.34
CTDNEP1-210ENST00000574322 RGS19P49795 217 aa29.64■■■□□ 2.34
CTDNEP1-210ENST00000574322 CACNA2D1P54289 1103 aa29.64■■■□□ 2.34
CTDNEP1-210ENST00000574322 TSPY1Q01534 308 aa29.64■■■□□ 2.34
CTDNEP1-210ENST00000574322 SLMAPQ14BN4 828 aa29.64■■■□□ 2.34
CTDNEP1-210ENST00000574322 MAK16Q9BXY0 300 aaKnown RBP29.64■■■□□ 2.34
CTDNEP1-210ENST00000574322 POPDC2Q9HBU9 364 aa29.64■■■□□ 2.34
CTDNEP1-210ENST00000574322 PLAAQ9Y263 795 aa29.64■■■□□ 2.34
CTDNEP1-210ENST00000574322 NR2E3Q9Y5X4 410 aa29.64■■■□□ 2.34
CTDNEP1-210ENST00000574322 PTPRDP23468 1912 aa29.64■■■□□ 2.34
CTDNEP1-210ENST00000574322 FAM193AP78312 1265 aa29.63■■■□□ 2.33
CTDNEP1-210ENST00000574322 YWHAHQ04917 246 aaPredicted RBP29.63■■■□□ 2.33
CTDNEP1-210ENST00000574322 KRT81Q14533 505 aa29.63■■■□□ 2.33
CTDNEP1-210ENST00000574322 GSTA5Q7RTV2 222 aa29.63■■■□□ 2.33
CTDNEP1-210ENST00000574322 LRRTM3Q86VH5 581 aa29.63■■■□□ 2.33
CTDNEP1-210ENST00000574322 RIN2Q8WYP3 895 aaPredicted RBP29.63■■■□□ 2.33
CTDNEP1-210ENST00000574322 FAM149B1Q96BN6 582 aa29.63■■■□□ 2.33
CTDNEP1-210ENST00000574322 ULBP1Q9BZM6 244 aa29.63■■■□□ 2.33
CTDNEP1-210ENST00000574322 PCDH10Q9P2E7 1040 aa29.63■■■□□ 2.33
CTDNEP1-210ENST00000574322 STAP1Q9ULZ2 295 aa29.63■■■□□ 2.33
CTDNEP1-210ENST00000574322 NLRC5Q86WI3 1866 aa29.63■■■□□ 2.33
CTDNEP1-210ENST00000574322 COL4A4P53420 1690 aaPredicted RBP29.63■■■□□ 2.33
CTDNEP1-210ENST00000574322 GOLGA8KD6RF30 607 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 TRAPPC3O43617 180 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 RNF40O75150 1001 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 RNASELQ05823 741 aaKnown RBP29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 MMRN1Q13201 1228 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 ZC3H12AQ5D1E8 599 aaKnown RBP29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 MFSD5Q6N075 450 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 IRGQQ8WZA9 623 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 NDRG1Q92597 394 aaKnown RBP29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 FAM193BQ96PV7 902 aaPredicted RBP29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 TMLHEQ9NVH6 421 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 FAN1Q9Y2M0 1017 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 NRP1O14786 923 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 POLR3GO15318 223 aaPredicted RBP29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 RARGP13631 454 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 PMS2P54278 862 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 DYNLT1P63172 113 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 OTUD1Q5VV17 481 aaPredicted RBP29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 SLC9A4Q6AI14 798 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 PM20D1Q6GTS8 502 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 GPRIN1Q7Z2K8 1008 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 TMEM199Q8N511 208 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 HAUS1Q96CS2 278 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 CASD1Q96PB1 797 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 PABPC3Q9H361 631 aaKnown RBP29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 PCDH9Q9HC56 1237 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 DMAP1Q9NPF5 467 aaPredicted RBP29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 ATP8A1Q9Y2Q0 1164 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 TTC3P53804 2025 aa29.62■■■□□ 2.33
CTDNEP1-210ENST00000574322 HOXA2O43364 376 aa29.61■■■□□ 2.33
CTDNEP1-210ENST00000574322 FYNP06241 537 aa29.61■■■□□ 2.33
CTDNEP1-210ENST00000574322 L1CAMP32004 1257 aa29.61■■■□□ 2.33
CTDNEP1-210ENST00000574322 ITGA8P53708 1063 aa29.61■■■□□ 2.33
CTDNEP1-210ENST00000574322 TRIP13Q15645 432 aaPredicted RBP29.61■■■□□ 2.33
CTDNEP1-210ENST00000574322 CA9Q16790 459 aa29.61■■■□□ 2.33
CTDNEP1-210ENST00000574322 DCAF6Q58WW2 860 aa29.61■■■□□ 2.33
CTDNEP1-210ENST00000574322 ANKRD20A8PQ5CZ79 823 aa29.61■■■□□ 2.33
CTDNEP1-210ENST00000574322 CALCOCO1Q9P1Z2 691 aa29.61■■■□□ 2.33
CTDNEP1-210ENST00000574322 NDC80O14777 642 aa29.6■■■□□ 2.33
CTDNEP1-210ENST00000574322 SYN3O14994 580 aa29.6■■■□□ 2.33
CTDNEP1-210ENST00000574322 ZBED1O96006 694 aa29.6■■■□□ 2.33
CTDNEP1-210ENST00000574322 TGM2P21980 687 aa29.6■■■□□ 2.33
CTDNEP1-210ENST00000574322 OR1G1P47890 313 aa29.6■■■□□ 2.33
CTDNEP1-210ENST00000574322 SULT1E1P49888 294 aa29.6■■■□□ 2.33
CTDNEP1-210ENST00000574322 NOMO1Q15155 1222 aa29.6■■■□□ 2.33
CTDNEP1-210ENST00000574322 ABI1Q8IZP0 508 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms