RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 WDR35Q9P2L0 1181 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 RAD54BQ9Y620 910 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 FLNBO75369 2602 aaKnown RBP12.66□□□□□ -0.38
CTNS-208ENST00000574218 HELZ2Q9BYK8 2649 aaKnown RBP12.66□□□□□ -0.38
CTNS-208ENST00000574218 SMG1Q96Q15 3661 aaKnown RBP12.66□□□□□ -0.38
CTNS-208ENST00000574218 CABIN1Q9Y6J0 2220 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 LOC400499M0QZD8 3231 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 A8MXQ7 604 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 FLRT2O43155 660 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 ZNF883P0CG24 379 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 TUBP50607 506 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 CYP4F3Q08477 520 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 RRAGBQ5VZM2 374 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 SLCO6A1Q86UG4 719 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 MIB1Q86YT6 1006 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 WDR49Q8IV35 697 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 OR5B17Q8NGF7 314 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 MRGPRX1Q96LB2 322 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 BBC3Q96PG8 261 aaPredicted RBP12.65□□□□□ -0.38
CTNS-208ENST00000574218 UBL7Q96S82 380 aaPredicted RBP12.65□□□□□ -0.38
CTNS-208ENST00000574218 ACOX2Q99424 681 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 GABRG3Q99928 467 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 MRPL45Q9BRJ2 306 aaKnown RBP12.65□□□□□ -0.38
CTNS-208ENST00000574218 GPR174Q9BXC1 333 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 ZNF518BQ9C0D4 1074 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 TM7SF3Q9NS93 570 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 CACNA2D2Q9NY47 1150 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 DKK4Q9UBT3 224 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 CHORDC1Q9UHD1 332 aaPredicted RBP12.65□□□□□ -0.38
CTNS-208ENST00000574218 ASXL3Q9C0F0 2248 aa12.65□□□□□ -0.38
CTNS-208ENST00000574218 GFRA2O00451 464 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 TRIM24O15164 1050 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 BCAT2O15382 392 aaPredicted RBP12.64□□□□□ -0.39
CTNS-208ENST00000574218 CACNG3O60359 315 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 CBFA2T3O75081 653 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 CILPO75339 1184 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 TACC1O75410 805 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 FAM163BP0C2L3 166 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 PRR29P0C7W0 189 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 TYRP14679 529 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 OXTRP30559 389 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 ABCG1P45844 678 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 DGKGP49619 791 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 TRPC3Q13507 836 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 E2F5Q15329 346 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 SCARA3Q6AZY7 606 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 TPGS1Q6ZTW0 290 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 LIMS2Q7Z4I7 341 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 SCUBE3Q8IX30 993 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 B3GALNT2Q8NCR0 500 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 UCMAQ8WVF2 138 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 TOE1Q96GM8 510 aaKnown RBP12.64□□□□□ -0.39
CTNS-208ENST00000574218 ZFRQ96KR1 1074 aaKnown RBP12.64□□□□□ -0.39
CTNS-208ENST00000574218 DUSP9Q99956 384 aaKnown RBP12.64□□□□□ -0.39
CTNS-208ENST00000574218 STRA6Q9BX79 667 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 SLC6A17Q9H1V8 727 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 CCSER2Q9H7U1 834 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 KIAA1586Q9HCI6 787 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 OLFML3Q9NRN5 406 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 NFE2L3Q9Y4A8 694 aa12.64□□□□□ -0.39
CTNS-208ENST00000574218 CKAP5Q14008 2032 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 TRABD2BA6NFA1 517 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 CLDN5O00501 218 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 SYNCRIPO60506 623 aaKnown RBP12.63□□□□□ -0.39
CTNS-208ENST00000574218 ACADMP11310 421 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 TNNI1P19237 187 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 GJB2P29033 226 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 SLC5A3P53794 718 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 CACNA2D1P54289 1103 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 GRIN1Q05586 938 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 WDR72Q3MJ13 1102 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 CCDC157Q569K6 752 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 DCAF12L1Q5VU92 463 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 TRAPPC11Q7Z392 1133 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 PDCD7Q8N8D1 485 aaKnown RBP12.63□□□□□ -0.39
CTNS-208ENST00000574218 CADM4Q8NFZ8 388 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 DNASE2BQ8WZ79 361 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 SNX19Q92543 992 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 DCBLD2Q96PD2 775 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 B3GNT5Q9BYG0 378 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 DPEP3Q9H4B8 488 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 DMAP1Q9NPF5 467 aaPredicted RBP12.63□□□□□ -0.39
CTNS-208ENST00000574218 CD93Q9NPY3 652 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 TLR8Q9NR97 1041 aaKnown RBP12.63□□□□□ -0.39
CTNS-208ENST00000574218 COMMD8Q9NX08 183 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 WSB2Q9NYS7 404 aaPredicted RBP12.63□□□□□ -0.39
CTNS-208ENST00000574218 GMIPQ9P107 970 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 PCDHGB2Q9Y5G2 931 aa12.63□□□□□ -0.39
CTNS-208ENST00000574218 PTPRJQ12913 1337 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 KNL1Q8NG31 2342 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 NPC1O15118 1278 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 TLR5O60602 858 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 DLATP10515 647 aaKnown RBP12.62□□□□□ -0.39
CTNS-208ENST00000574218 CASP5P51878 434 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 ZNF132P52740 706 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 SF3A1Q15459 793 aaKnown RBP12.62□□□□□ -0.39
CTNS-208ENST00000574218 TEAD4Q15561 434 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 HLA-BQ31612 363 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 INAVAQ3KP66 663 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 SNX30Q5VWJ9 437 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms