RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 HOOK1Q9UJC3 728 aaKnown RBP11.93□□□□□ -0.5
RPAIN-214ENST00000574003 NAGPAQ9UK23 515 aa11.93□□□□□ -0.5
RPAIN-214ENST00000574003 RNF225M0QZC1 329 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-214ENST00000574003 PIK3R2O00459 728 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 ATG13O75143 517 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 RPP40O75818 363 aaKnown RBP11.92□□□□□ -0.5
RPAIN-214ENST00000574003 KAT7O95251 611 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 KLF8O95600 359 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-214ENST00000574003 ADH1CP00326 375 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 HOXA6P31267 233 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 ATP5C1P36542 298 aaKnown RBP11.92□□□□□ -0.5
RPAIN-214ENST00000574003 PDE4CQ08493 712 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 STIM1Q13586 685 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 FBXO43Q4G163 708 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 ARHGAP17Q68EM7 881 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 LAIR1Q6GTX8 287 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 TMEM92Q6UXU6 159 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 TPGS1Q6ZTW0 290 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 SYT13Q7L8C5 426 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 MIB1Q86YT6 1006 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 ARHGEF19Q8IW93 802 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 PHTF2Q8N3S3 785 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 GAB3Q8WWW8 586 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 TFAP2BQ92481 460 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 PNKPQ96T60 521 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 TPSD1Q9BZJ3 242 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 CYLDQ9NQC7 956 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 ARHGEF4Q9NR80 690 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 TBC1D14Q9P2M4 693 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 RASAL2Q9UJF2 1139 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 TSPAN16Q9UKR8 245 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 HCN2Q9UL51 889 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 USP3Q9Y6I4 520 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 DNAH14Q0VDD8 3507 aa11.92□□□□□ -0.5
RPAIN-214ENST00000574003 SGK1O00141 431 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 TULP3O75386 442 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 GABBR2O75899 941 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 KLKB1P03952 638 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 APODP05090 189 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 RETP07949 1114 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 CCDC192P0DO97 292 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 TRIM21P19474 475 aaKnown RBP11.91□□□□□ -0.5
RPAIN-214ENST00000574003 BRD2P25440 801 aaKnown RBP11.91□□□□□ -0.5
RPAIN-214ENST00000574003 WASP42768 502 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 TKTL1P51854 596 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 DGKEP52429 567 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 GAD2Q05329 585 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 EFEMP1Q12805 493 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 ANO7Q6IWH7 933 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 HTR3DQ70Z44 454 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 RRAGAQ7L523 313 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 CCDC186Q7Z3E2 898 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 ETFBKMTQ8IXQ9 262 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 ELOA2Q8IYF1 753 aaPredicted RBP11.91□□□□□ -0.5
RPAIN-214ENST00000574003 ANKRD52Q8NB46 1076 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 TXNDC5Q8NBS9 432 aaKnown RBP11.91□□□□□ -0.5
RPAIN-214ENST00000574003 TSTD1Q8NFU3 115 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 LMO3Q8TAP4 145 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 SECISBP2LQ93073 1101 aaKnown RBP11.91□□□□□ -0.5
RPAIN-214ENST00000574003 CEP63Q96MT8 703 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 MED15Q96RN5 788 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 ZSWIM1Q9BR11 485 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 SRRTQ9BXP5 876 aaKnown RBP11.91□□□□□ -0.5
RPAIN-214ENST00000574003 ULBP1Q9BZM6 244 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 PNPLA8Q9NP80 782 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 SPHK2Q9NRA0 654 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 PLK2Q9NYY3 685 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 DNMT3LQ9UJW3 386 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 NCOR2Q9Y618 2525 aa11.91□□□□□ -0.5
RPAIN-214ENST00000574003 CNOT1A5YKK6 2376 aaKnown RBP11.9□□□□□ -0.5
RPAIN-214ENST00000574003 CACNA1AO00555 2505 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 NEDD8-MDP1E9PL57 170 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 HOXC11O43248 304 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-214ENST00000574003 GDF9O60383 454 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 ADAM23O75077 832 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 STC2O76061 302 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 APBB3O95704 486 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 CNR2P34972 360 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 KIR2DL1P43626 348 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-214ENST00000574003 RGS7P49802 495 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 PAK1Q13153 545 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 SF3A2Q15428 464 aaKnown RBP11.9□□□□□ -0.5
RPAIN-214ENST00000574003 SGO2Q562F6 1265 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 RAB41Q5JT25 222 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 TMEM270Q6UE05 265 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 TOGARAM2Q6ZUX3 1019 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 BHLHA9Q7RTU4 235 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 PPM1KQ8N3J5 372 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 FRMD1Q8N878 549 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 IL17RCQ8NAC3 791 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 EXOC4Q96A65 974 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 ACDQ96AP0 544 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 NT5C1BQ96P26 610 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 ARRDC1-AS1Q9H2J1 176 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 METTL14Q9HCE5 456 aaKnown RBP11.9□□□□□ -0.5
RPAIN-214ENST00000574003 SEMA4GQ9NTN9 838 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 DNAJC17Q9NVM6 304 aaKnown RBP11.9□□□□□ -0.5
RPAIN-214ENST00000574003 CIZ1Q9ULV3 898 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-214ENST00000574003 MMP17Q9ULZ9 603 aa11.9□□□□□ -0.5
RPAIN-214ENST00000574003 PCDHB4Q9Y5E5 795 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms