RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 FAM49BQ9NUQ9 324 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 IL37Q9NZH6 218 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 TNRC6BQ9UPQ9 1833 aaKnown RBP12.88□□□□□ -0.35
CCDC40-210ENST00000573903 NEDD8-MDP1E9PL57 170 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 IKBKBO14920 756 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 ADAM23O75077 832 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 VNN1O95497 513 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 MYL1P05976 194 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 ZDHHC11BP0C7U3 371 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 CEACAM1P13688 526 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 HNRNPLP14866 589 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCDC40-210ENST00000573903 PFKFB1P16118 471 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 CSRP1P21291 193 aaKnown RBP12.87□□□□□ -0.35
CCDC40-210ENST00000573903 CMA1P23946 247 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 ADORA2BP29275 332 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 NTSR1P30989 418 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 ATP5C1P36542 298 aaKnown RBP12.87□□□□□ -0.35
CCDC40-210ENST00000573903 ATXN3P54252 364 aaPredicted RBP12.87□□□□□ -0.35
CCDC40-210ENST00000573903 IRX4P78413 519 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 FOXC1Q12948 553 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 STK4Q13043 487 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 ORC1Q13415 861 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 KMT5BQ4FZB7 885 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 TADA2BQ86TJ2 420 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 CRYBG2Q8N1P7 616 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 PHTF2Q8N3S3 785 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 JAKMIP2Q96AA8 810 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 ELMO3Q96BJ8 720 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 SMOQ99835 787 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 BBS2Q9BXC9 721 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 SLC32A1Q9H598 525 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 CSNK1G1Q9HCP0 422 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 DNAJC17Q9NVM6 304 aaKnown RBP12.87□□□□□ -0.35
CCDC40-210ENST00000573903 DMAC2Q9NW81 257 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 WDR35Q9P2L0 1181 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 USP25Q9UHP3 1055 aa12.87□□□□□ -0.35
CCDC40-210ENST00000573903 CNOT1A5YKK6 2376 aaKnown RBP12.87□□□□□ -0.35
CCDC40-210ENST00000573903 CEP192Q8TEP8 1941 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 A0A1W2PQ27 194 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 A0A1W2PQ64 194 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 A0A1W2PQD8 194 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 GOLGA6L4A6NEF3 574 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 ACTN4O43707 911 aaKnown RBP12.86□□□□□ -0.35
CCDC40-210ENST00000573903 KLRC4O43908 158 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 ASS1P00966 412 aaKnown RBP12.86□□□□□ -0.35
CCDC40-210ENST00000573903 HLA-DRAP01903 254 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 CFIP05156 583 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 KRT13P13646 458 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 HOXD12P35452 270 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 MAPK8P45983 427 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 DLG4P78352 724 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 RPL6Q02878 288 aaKnown RBP12.86□□□□□ -0.35
CCDC40-210ENST00000573903 HTR3DQ70Z44 454 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 SV2AQ7L0J3 742 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 RABEPKQ7Z6M1 372 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 TMEM25Q86YD3 366 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 CHPFQ8IZ52 775 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 ZMIZ2Q8NF64 920 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 CEP76Q8TAP6 659 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 TMEM174Q8WUU8 243 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 PAGE5Q96GU1 130 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 CCDC34Q96HJ3 373 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 NT5C1AQ9BXI3 368 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 KCTD10Q9H3F6 313 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 CYLDQ9NQC7 956 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 HMGXB4Q9UGU5 601 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 SCML2Q9UQR0 700 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 PCDHA5Q9Y5H7 936 aa12.86□□□□□ -0.35
CCDC40-210ENST00000573903 ATXN2Q99700 1313 aaKnown RBP12.86□□□□□ -0.35
CCDC40-210ENST00000573903 A0A1B0GVL5 298 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 CDX4O14627 284 aaPredicted RBP12.85□□□□□ -0.35
CCDC40-210ENST00000573903 GIPC1O14908 333 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 CACNG3O60359 315 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 ZNF217O75362 1048 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 BEST1O76090 585 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 TYRP14679 529 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 ENGP17813 658 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 ACO1P21399 889 aaKnown RBP12.85□□□□□ -0.35
CCDC40-210ENST00000573903 WASP42768 502 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 PTGER3P43115 390 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 SYKP43405 635 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 ASPAP45381 313 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 PSEN1P49768 467 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 VAMP7P51809 220 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 MAP7D1Q3KQU3 841 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 SPOPLQ6IQ16 392 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 TPGS1Q6ZTW0 290 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 CLEC20AQ6ZU45 233 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 INTS8Q75QN2 995 aaKnown RBP12.85□□□□□ -0.35
CCDC40-210ENST00000573903 HDDC3Q8N4P3 179 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 C12orf29Q8N999 325 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 CYFIP2Q96F07 1278 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 HNRNPABQ99729 332 aaKnown RBP12.85□□□□□ -0.35
CCDC40-210ENST00000573903 KLF16Q9BXK1 252 aaPredicted RBP12.85□□□□□ -0.35
CCDC40-210ENST00000573903 CYP3A43Q9HB55 503 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 GDPD2Q9HCC8 539 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 PNPLA8Q9NP80 782 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 CALCOCO1Q9P1Z2 691 aa12.85□□□□□ -0.35
CCDC40-210ENST00000573903 MBD1Q9UIS9 605 aaPredicted RBP12.85□□□□□ -0.35
CCDC40-210ENST00000573903 HPSEQ9Y251 543 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms