RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 CUL2Q13617 745 aa9.58□□□□□ -0.88
NDE1-207ENST00000573203 PPP2R5DQ14738 602 aa9.58□□□□□ -0.88
NDE1-207ENST00000573203 EML3Q32P44 896 aa9.58□□□□□ -0.88
NDE1-207ENST00000573203 PPP1R26Q5T8A7 1209 aaPredicted RBP9.58□□□□□ -0.88
NDE1-207ENST00000573203 CLEC20AQ6ZU45 233 aa9.58□□□□□ -0.88
NDE1-207ENST00000573203 DDX42Q86XP3 938 aaKnown RBP eCLIP9.58□□□□□ -0.88
NDE1-207ENST00000573203 MAML2Q8IZL2 1156 aaPredicted RBP9.58□□□□□ -0.88
NDE1-207ENST00000573203 SLC4A11Q8NBS3 891 aa9.58□□□□□ -0.88
NDE1-207ENST00000573203 NKD2Q969F2 451 aaPredicted RBP9.58□□□□□ -0.88
NDE1-207ENST00000573203 EXOC4Q96A65 974 aa9.58□□□□□ -0.88
NDE1-207ENST00000573203 IER2Q9BTL4 223 aa9.58□□□□□ -0.88
NDE1-207ENST00000573203 SRRTQ9BXP5 876 aaKnown RBP9.58□□□□□ -0.88
NDE1-207ENST00000573203 NACA2Q9H009 215 aa9.58□□□□□ -0.88
NDE1-207ENST00000573203 HSD3B7Q9H2F3 369 aa9.58□□□□□ -0.88
NDE1-207ENST00000573203 FAM124BQ9H5Z6 455 aaPredicted RBP9.58□□□□□ -0.88
NDE1-207ENST00000573203 ECT2Q9H8V3 914 aa9.58□□□□□ -0.88
NDE1-207ENST00000573203 PNPLA8Q9NP80 782 aa9.58□□□□□ -0.88
NDE1-207ENST00000573203 TLR8Q9NR97 1041 aaKnown RBP9.58□□□□□ -0.88
NDE1-207ENST00000573203 R4GN57 208 aa9.58□□□□□ -0.88
NDE1-207ENST00000573203 ZFHX2Q9C0A1 2572 aaPredicted RBP9.58□□□□□ -0.88
NDE1-207ENST00000573203 FAM92AA1XBS5 289 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 PRR23AA6NEV1 266 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 OTOL1A6NHN0 477 aaPredicted RBP9.57□□□□□ -0.88
NDE1-207ENST00000573203 HHLA1C9JL84 531 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 SLC9A3R1O14745 358 aaPredicted RBP9.57□□□□□ -0.88
NDE1-207ENST00000573203 PMM2O15305 246 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 COCHO43405 550 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 NFATC1O95644 943 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 PTMAP06454 111 aaKnown RBP9.57□□□□□ -0.88
NDE1-207ENST00000573203 ZNF18P17022 549 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 ACO1P21399 889 aaKnown RBP9.57□□□□□ -0.88
NDE1-207ENST00000573203 TBXAS1P24557 533 aaPredicted RBP9.57□□□□□ -0.88
NDE1-207ENST00000573203 GJA4P35212 333 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 TUBP50607 506 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 CCR3P51677 355 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 SLC8A3P57103 927 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 KCNH2Q12809 1159 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 GRSF1Q12849 480 aaKnown RBP eCLIP9.57□□□□□ -0.88
NDE1-207ENST00000573203 ZNF528Q3MIS6 628 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 SNX30Q5VWJ9 437 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 TSSK4Q6SA08 328 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 ASCL5Q7RTU5 278 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 GPRIN1Q7Z2K8 1008 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 CREBRFQ8IUR6 639 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 TRIM59Q8IWR1 403 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 NT5C1BQ96P26 610 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 DUSP16Q9BY84 665 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 LINC00597Q9H2U6 94 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 SEMA4AQ9H3S1 761 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 CCSER2Q9H7U1 834 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 PRMT8Q9NR22 394 aaPredicted RBP9.57□□□□□ -0.88
NDE1-207ENST00000573203 CFAP97Q9P2B7 532 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 RWDD2AQ9UIY3 292 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 SCML2Q9UQR0 700 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.57□□□□□ -0.88
NDE1-207ENST00000573203 ADGRG1Q9Y653 693 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 ATG2BQ96BY7 2078 aa9.57□□□□□ -0.88
NDE1-207ENST00000573203 USP34Q70CQ2 3546 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 TRDMT1O14717 391 aaKnown RBP9.56□□□□□ -0.88
NDE1-207ENST00000573203 SCAMP3O14828 347 aaKnown RBP9.56□□□□□ -0.88
NDE1-207ENST00000573203 P4HA2O15460 535 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 CYP26A1O43174 497 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 TLR5O60602 858 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 AFPP02771 609 aaKnown RBP9.56□□□□□ -0.88
NDE1-207ENST00000573203 ZDHHC11BP0C7U3 371 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 CD19P15391 556 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 MSNP26038 577 aaKnown RBP9.56□□□□□ -0.88
NDE1-207ENST00000573203 CXCL12P48061 93 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 GALK1P51570 392 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 NRLP54845 237 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 MARSP56192 900 aaKnown RBP9.56□□□□□ -0.88
NDE1-207ENST00000573203 GSDMDP57764 484 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 CCINQ13939 588 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 GAS6Q14393 721 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 TPD52L1Q16890 204 aaPredicted RBP9.56□□□□□ -0.88
NDE1-207ENST00000573203 SGO2Q562F6 1265 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 TMEM196Q5HYL7 178 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 ARHGAP17Q68EM7 881 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 Q6ZS52 159 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 PPM1KQ8N3J5 372 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 SYNPOQ8N3V7 929 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 SPEM1Q8N4L4 309 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 KIAA1958Q8N8K9 716 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 ATRIPQ8WXE1 791 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 CHFRQ96EP1 664 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 P2RY13Q9BPV8 354 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 ZSCAN32Q9NX65 697 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 TBC1D14Q9P2M4 693 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 HESX1Q9UBX0 185 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 SH3BP1Q9Y3L3 701 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 PCDHB4Q9Y5E5 795 aa9.56□□□□□ -0.88
NDE1-207ENST00000573203 MYOFQ9NZM1 2061 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 WDR87Q6ZQQ6 2873 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 A0A1W2PQH9 124 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 E2F8A0AVK6 867 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 TBX18O95935 607 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 EGFP01133 1207 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 LMNAP02545 664 aaKnown RBP9.55□□□□□ -0.88
NDE1-207ENST00000573203 CYP17A1P05093 508 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 IRF1P10914 325 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms