RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 MICAL2O94851 1124 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 IL1BP01584 269 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 ANPEPP15144 967 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 OSBPP22059 807 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 ZNF667Q5HYK9 610 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 NBPF12Q5TAG4 269 aaPredicted RBP18.13■□□□□ 0.49
SCARF1-205ENST00000571272 ANGEL2Q5VTE6 544 aaKnown RBP18.13■□□□□ 0.49
SCARF1-205ENST00000571272 WDR78Q5VTH9 848 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 RTKN2Q8IZC4 609 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 CCDC33Q8N5R6 958 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 TTLL6Q8N841 843 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 GATA6Q92908 595 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 KCNN1Q92952 543 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 ANKRD36BP1Q96IX9 119 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 WWP1Q9H0M0 922 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 NRBP2Q9NSY0 501 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 ASNSD1Q9NWL6 643 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 WDR35Q9P2L0 1181 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 STAT5BP51692 787 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 TARBP2Q15633 366 aaKnown RBP18.13■□□□□ 0.49
SCARF1-205ENST00000571272 C1orf146Q5VVC0 180 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 PRAMEF18Q5VWM3 479 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 TRNP1Q6NT89 227 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 IZUMO2Q6UXV1 221 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 CRLF3Q8IUI8 442 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 TEX13BQ9BXU2 312 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 DNAJC5Q9H3Z4 198 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 TAGLN3Q9UI15 199 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 ANGPTL2Q9UKU9 493 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.13■□□□□ 0.49
SCARF1-205ENST00000571272 B4GALT5O43286 388 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 CIB2O75838 187 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 HMGCRP04035 888 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 GJB1P08034 283 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 PDGFRAP16234 1089 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 YY1P25490 414 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 GRM1Q13255 1194 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 KRT81Q14533 505 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 SLC4A11Q8NBS3 891 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 RXFP2Q8WXD0 754 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 ELOVL4Q9GZR5 314 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 SIRPGQ9P1W8 387 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 PAK5Q9P286 719 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 PLA2G4CQ9UP65 541 aa18.13■□□□□ 0.49
SCARF1-205ENST00000571272 PSME4Q14997 1843 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 BRWD3Q6RI45 1802 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 MAGEA13PA6NCF6 341 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 TM7SF2O76062 418 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 CXCL8P10145 99 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 PTPN11Q06124 597 aaPredicted RBP18.12■□□□□ 0.49
SCARF1-205ENST00000571272 LAMTOR4Q0VGL1 99 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 TEX44Q53QW1 395 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 LGSNQ5TDP6 509 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 FAM91A1Q658Y4 838 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 CYP4V2Q6ZWL3 525 aaPredicted RBP18.12■□□□□ 0.49
SCARF1-205ENST00000571272 EEPD1Q7L9B9 569 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 PLD5Q8N7P1 536 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 IFT43Q96FT9 208 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 RNF157Q96PX1 679 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 PNPLA8Q9NP80 782 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 AP1G2O75843 785 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 ZBED1O96006 694 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 UBA1P22314 1058 aaKnown RBP18.12■□□□□ 0.49
SCARF1-205ENST00000571272 C6orf163Q5TEZ5 329 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 AP1ARQ63HQ0 302 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 EEF1DP3Q658K8 133 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 UNC5AQ6ZN44 842 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 TRIM42Q8IWZ5 723 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 MPP5Q8N3R9 675 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 ZNF280CQ8ND82 737 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 MCRS1Q96EZ8 462 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 MMP19Q99542 508 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 PPM1HQ9ULR3 514 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 AFG3L2Q9Y4W6 797 aa18.12■□□□□ 0.49
SCARF1-205ENST00000571272 PRPSAP2O60256 369 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 APOEP02649 317 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 ZNF143P52747 638 aaPredicted RBP18.11■□□□□ 0.49
SCARF1-205ENST00000571272 EFNA5P52803 228 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 INHBEP58166 350 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 TFDP2Q14188 446 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 OR6B2Q6IFH4 312 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 NET1Q7Z628 596 aaPredicted RBP18.11■□□□□ 0.49
SCARF1-205ENST00000571272 APLFQ8IW19 511 aaPredicted RBP18.11■□□□□ 0.49
SCARF1-205ENST00000571272 MTBPQ96DY7 904 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 CCDC106Q9BWC9 280 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 ETNK2Q9NVF9 386 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 SIX4Q9UIU6 781 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 HBS1LQ9Y450 684 aaKnown RBP18.11■□□□□ 0.49
SCARF1-205ENST00000571272 PPME1Q9Y570 386 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 HMX2A2RU54 273 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 SLC15A5A6NIM6 579 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 F8W8V4 182 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 MAFO75444 373 aaPredicted RBP18.11■□□□□ 0.49
SCARF1-205ENST00000571272 GPD1P21695 349 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 BCAR1P56945 870 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 ACTR3P61158 418 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 CWF19L1Q69YN2 538 aaKnown RBP18.11■□□□□ 0.49
SCARF1-205ENST00000571272 TRIM50Q86XT4 487 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 HEXIM2Q96MH2 286 aaKnown RBP18.11■□□□□ 0.49
SCARF1-205ENST00000571272 APOL6Q9BWW8 343 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms