RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 PLXNA2O75051 1894 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 TULP1O00294 542 aaPredicted RBP11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 GFRA2O00451 464 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 TRIM66O15016 1216 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 PCDHGA12O60330 932 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 CACNG3O60359 315 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 FAM13AO94988 1023 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 JUPP14923 745 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 ADSSP30520 456 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 PRPHP41219 470 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 GRK6P43250 576 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 TPMTP51580 245 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 CACNA2D1P54289 1103 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 CXADRP78310 365 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 KCNC4Q03721 635 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 IFRD2Q12894 506 aaPredicted RBP11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 RTP5Q14D33 572 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 SF3A1Q15459 793 aaKnown RBP11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 TDRD10Q5VZ19 366 aaKnown RBP11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 LIMS2Q7Z4I7 341 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 KCTD17Q8N5Z5 321 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 CSGALNACT2Q8N6G5 542 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 FAM181AQ8N9Y4 354 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 FBXO18Q8NFZ0 1043 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 SCFD1Q8WVM8 642 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 POMGNT1Q8WZA1 660 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 BAP1Q92560 729 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 SLITRK1Q96PX8 696 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 HNRNPABQ99729 332 aaKnown RBP11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 DUSP9Q99956 384 aaKnown RBP11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 TRIM9Q9C026 710 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 SEMA4CQ9C0C4 833 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 SIX4Q9UIU6 781 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 STON1Q9Y6Q2 735 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 COL12A1Q99715 3063 aa11.1□□□□□ -0.63
CTDNEP1-202ENST00000570380 PIEZO2Q9H5I5 2752 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 NEDD8-MDP1E9PL57 170 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 ERVH48-1M5A8F1 160 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 LAD1O00515 517 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 KRT19P08727 400 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 PDGFRBP09619 1106 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 CISD3P0C7P0 127 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 TYRP14679 529 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 OXTRP30559 389 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 AFF3P51826 1226 aaKnown RBP11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 TLE3Q04726 772 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 TARDBPQ13148 414 aaKnown RBP eCLIP11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 GNL2Q13823 731 aaKnown RBP11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 DHX8Q14562 1220 aaKnown RBP11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 MAPRE1Q15691 268 aaKnown RBP11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 TMEM119Q4V9L6 283 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 TAF1BQ53T94 588 aaPredicted RBP11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 DPH6Q7L8W6 267 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 GPBP1Q86WP2 473 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 FMNL3Q8IVF7 1028 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 ENGASEQ8NFI3 743 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 MYCBPAPQ8TBZ2 947 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 CACTINQ8WUQ7 758 aaKnown RBP11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 XPO6Q96QU8 1125 aaKnown RBP11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 NRSN2Q9GZP1 204 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 FTSJ1Q9UET6 329 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 CHORDC1Q9UHD1 332 aaPredicted RBP11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 ITGA11Q9UKX5 1188 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 ANKRD6Q9Y2G4 727 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 NME7Q9Y5B8 376 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 PCDHGA1Q9Y5H4 931 aa11.09□□□□□ -0.63
CTDNEP1-202ENST00000570380 ARID1BQ8NFD5 2236 aaPredicted RBP11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 B8ZZF3 427 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 H0Y8X5 98 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 IGLV3-19P01714 112 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 IRF1P10914 325 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 YWHAQP27348 245 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 HNF1BP35680 557 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 CCT8P50990 548 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 RBP5P82980 135 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 SRSF1Q07955 248 aaKnown RBP eCLIP11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 STARD3Q14849 445 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 MDH1BQ5I0G3 518 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 KCNT1Q5JUK3 1230 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 HECTD3Q5T447 861 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 TMPRSS6Q8IU80 811 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 BRSK2Q8IWQ3 736 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 SPACA3Q8IXA5 215 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 FGF11Q92914 225 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 IGSF8Q969P0 613 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 WBP1Q96G27 269 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 CDK5RAP3Q96JB5 506 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 FAM213AQ9BRX8 229 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 NUP58Q9BVL2 599 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 BBS2Q9BXC9 721 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 ZHX3Q9H4I2 956 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 CCSER2Q9H7U1 834 aa11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.08□□□□□ -0.64
CTDNEP1-202ENST00000570380 CBX4O00257 560 aa11.07□□□□□ -0.64
CTDNEP1-202ENST00000570380 PAPSS1O43252 624 aaPredicted RBP11.07□□□□□ -0.64
CTDNEP1-202ENST00000570380 GREM1O60565 184 aa11.07□□□□□ -0.64
CTDNEP1-202ENST00000570380 WISP1O95388 367 aa11.07□□□□□ -0.64
CTDNEP1-202ENST00000570380 WARSP23381 471 aaKnown RBP11.07□□□□□ -0.64
CTDNEP1-202ENST00000570380 ABCD1P33897 745 aa11.07□□□□□ -0.64
CTDNEP1-202ENST00000570380 IL12RB1P42701 662 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms