RNA–Protein interactions for RNA: ENST00000569783.1

CDH11-218, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 539 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-218ENST00000569783 TRIM61Q5EBN2 209 aa20.46■□□□□ 0.87
CDH11-218ENST00000569783 GRAMD4Q6IC98 578 aa20.46■□□□□ 0.87
CDH11-218ENST00000569783 SDE2Q6IQ49 451 aa20.46■□□□□ 0.87
CDH11-218ENST00000569783 HTR3DQ70Z44 454 aa20.46■□□□□ 0.87
CDH11-218ENST00000569783 ARMCX6Q7L4S7 300 aa20.46■□□□□ 0.87
CDH11-218ENST00000569783 SYT12Q8IV01 421 aa20.46■□□□□ 0.87
CDH11-218ENST00000569783 C12orf29Q8N999 325 aa20.46■□□□□ 0.87
CDH11-218ENST00000569783 EVLQ9UI08 416 aaPredicted RBP20.46■□□□□ 0.87
CDH11-218ENST00000569783 EPG5Q9HCE0 2579 aa20.45■□□□□ 0.86
CDH11-218ENST00000569783 THADAQ6YHU6 1953 aa20.45■□□□□ 0.86
CDH11-218ENST00000569783 HLA-DRAP01903 254 aa20.45■□□□□ 0.86
CDH11-218ENST00000569783 CHRM1P11229 460 aaPredicted RBP20.45■□□□□ 0.86
CDH11-218ENST00000569783 PFKFB1P16118 471 aa20.45■□□□□ 0.86
CDH11-218ENST00000569783 ASPAP45381 313 aa20.45■□□□□ 0.86
CDH11-218ENST00000569783 VAMP7P51809 220 aa20.45■□□□□ 0.86
CDH11-218ENST00000569783 UAP1L1Q3KQV9 507 aa20.45■□□□□ 0.86
CDH11-218ENST00000569783 SH3PXD2AQ5TCZ1 1133 aa20.45■□□□□ 0.86
CDH11-218ENST00000569783 LYSMD4Q5XG99 296 aa20.45■□□□□ 0.86
CDH11-218ENST00000569783 SPOPLQ6IQ16 392 aa20.45■□□□□ 0.86
CDH11-218ENST00000569783 CCDC150Q8NCX0 1101 aa20.45■□□□□ 0.86
CDH11-218ENST00000569783 JAKMIP2Q96AA8 810 aa20.45■□□□□ 0.86
CDH11-218ENST00000569783 BBS2Q9BXC9 721 aa20.45■□□□□ 0.86
CDH11-218ENST00000569783 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.45■□□□□ 0.86
CDH11-218ENST00000569783 DNAJC17Q9NVM6 304 aaKnown RBP20.45■□□□□ 0.86
CDH11-218ENST00000569783 HMGXB4Q9UGU5 601 aa20.45■□□□□ 0.86
CDH11-218ENST00000569783 SCML2Q9UQR0 700 aa20.45■□□□□ 0.86
CDH11-218ENST00000569783 CNOT1A5YKK6 2376 aaKnown RBP20.45■□□□□ 0.86
CDH11-218ENST00000569783 ABCA7Q8IZY2 2146 aa20.45■□□□□ 0.86
CDH11-218ENST00000569783 A0A1B0GVL5 298 aa20.44■□□□□ 0.86
CDH11-218ENST00000569783 NEDD8-MDP1E9PL57 170 aa20.44■□□□□ 0.86
CDH11-218ENST00000569783 CDX4O14627 284 aaPredicted RBP20.44■□□□□ 0.86
CDH11-218ENST00000569783 AP5Z1O43299 807 aa20.44■□□□□ 0.86
CDH11-218ENST00000569783 CEACAM1P13688 526 aa20.44■□□□□ 0.86
CDH11-218ENST00000569783 HOXB2P14652 356 aa20.44■□□□□ 0.86
CDH11-218ENST00000569783 CMA1P23946 247 aa20.44■□□□□ 0.86
CDH11-218ENST00000569783 NTSR1P30989 418 aa20.44■□□□□ 0.86
CDH11-218ENST00000569783 ZNF252P-AS1Q0IIN9 211 aa20.44■□□□□ 0.86
CDH11-218ENST00000569783 MAP7D1Q3KQU3 841 aa20.44■□□□□ 0.86
CDH11-218ENST00000569783 SLC36A4Q6YBV0 504 aa20.44■□□□□ 0.86
CDH11-218ENST00000569783 FRMD1Q8N878 549 aa20.44■□□□□ 0.86
CDH11-218ENST00000569783 WBP2Q969T9 261 aa20.44■□□□□ 0.86
CDH11-218ENST00000569783 CYFIP2Q96F07 1278 aa20.44■□□□□ 0.86
CDH11-218ENST00000569783 HNRNPABQ99729 332 aaKnown RBP20.44■□□□□ 0.86
CDH11-218ENST00000569783 NT5C1AQ9BXI3 368 aa20.44■□□□□ 0.86
CDH11-218ENST00000569783 KLF16Q9BXK1 252 aaPredicted RBP20.44■□□□□ 0.86
CDH11-218ENST00000569783 CYLDQ9NQC7 956 aa20.44■□□□□ 0.86
CDH11-218ENST00000569783 WDR35Q9P2L0 1181 aa20.44■□□□□ 0.86
CDH11-218ENST00000569783 PCDHA5Q9Y5H7 936 aa20.44■□□□□ 0.86
CDH11-218ENST00000569783 MAPK13O15264 365 aa20.43■□□□□ 0.86
CDH11-218ENST00000569783 TBX18O95935 607 aa20.43■□□□□ 0.86
CDH11-218ENST00000569783 KRT13P13646 458 aa20.43■□□□□ 0.86
CDH11-218ENST00000569783 TYRP14679 529 aa20.43■□□□□ 0.86
CDH11-218ENST00000569783 CSRP1P21291 193 aaKnown RBP20.43■□□□□ 0.86
CDH11-218ENST00000569783 ACO1P21399 889 aaKnown RBP20.43■□□□□ 0.86
CDH11-218ENST00000569783 PTGER3P43115 390 aa20.43■□□□□ 0.86
CDH11-218ENST00000569783 PKP1Q13835 747 aa20.43■□□□□ 0.86
CDH11-218ENST00000569783 TPGS1Q6ZTW0 290 aa20.43■□□□□ 0.86
CDH11-218ENST00000569783 CLEC20AQ6ZU45 233 aa20.43■□□□□ 0.86
CDH11-218ENST00000569783 INTS8Q75QN2 995 aaKnown RBP20.43■□□□□ 0.86
CDH11-218ENST00000569783 TADA2BQ86TJ2 420 aa20.43■□□□□ 0.86
CDH11-218ENST00000569783 CHPFQ8IZ52 775 aa20.43■□□□□ 0.86
CDH11-218ENST00000569783 SPRYD3Q8NCJ5 442 aa20.43■□□□□ 0.86
CDH11-218ENST00000569783 CYP3A43Q9HB55 503 aa20.43■□□□□ 0.86
CDH11-218ENST00000569783 PNPLA8Q9NP80 782 aa20.43■□□□□ 0.86
CDH11-218ENST00000569783 MBD1Q9UIS9 605 aaPredicted RBP20.43■□□□□ 0.86
CDH11-218ENST00000569783 TRAF3IP3Q9Y228 551 aa20.43■□□□□ 0.86
CDH11-218ENST00000569783 STARD13Q9Y3M8 1113 aa20.43■□□□□ 0.86
CDH11-218ENST00000569783 NUP205Q92621 2012 aa20.43■□□□□ 0.86
CDH11-218ENST00000569783 GIPC1O14908 333 aa20.42■□□□□ 0.86
CDH11-218ENST00000569783 CYP26A1O43174 497 aa20.42■□□□□ 0.86
CDH11-218ENST00000569783 CACNG3O60359 315 aa20.42■□□□□ 0.86
CDH11-218ENST00000569783 NR2F2P24468 414 aa20.42■□□□□ 0.86
CDH11-218ENST00000569783 HOXD12P35452 270 aa20.42■□□□□ 0.86
CDH11-218ENST00000569783 WASP42768 502 aa20.42■□□□□ 0.86
CDH11-218ENST00000569783 PLA2G4AP47712 749 aa20.42■□□□□ 0.86
CDH11-218ENST00000569783 PGFP49763 221 aa20.42■□□□□ 0.86
CDH11-218ENST00000569783 ATXN3P54252 364 aaPredicted RBP20.42■□□□□ 0.86
CDH11-218ENST00000569783 RPL6Q02878 288 aaKnown RBP20.42■□□□□ 0.86
CDH11-218ENST00000569783 INCA1Q0VD86 236 aa20.42■□□□□ 0.86
CDH11-218ENST00000569783 SPATA32Q96LK8 384 aa20.42■□□□□ 0.86
CDH11-218ENST00000569783 DNMT3LQ9UJW3 386 aa20.42■□□□□ 0.86
CDH11-218ENST00000569783 MYOFQ9NZM1 2061 aa20.42■□□□□ 0.86
CDH11-218ENST00000569783 TRIM24O15164 1050 aa20.41■□□□□ 0.86
CDH11-218ENST00000569783 ZNF217O75362 1048 aa20.41■□□□□ 0.86
CDH11-218ENST00000569783 CFIP05156 583 aa20.41■□□□□ 0.86
CDH11-218ENST00000569783 RARGP13631 454 aa20.41■□□□□ 0.86
CDH11-218ENST00000569783 GABRG2P18507 467 aa20.41■□□□□ 0.86
CDH11-218ENST00000569783 RPL13P26373 211 aaKnown RBP20.41■□□□□ 0.86
CDH11-218ENST00000569783 SYKP43405 635 aa20.41■□□□□ 0.86
CDH11-218ENST00000569783 MAPK8P45983 427 aa20.41■□□□□ 0.86
CDH11-218ENST00000569783 PSEN1P49768 467 aa20.41■□□□□ 0.86
CDH11-218ENST00000569783 FOXC1Q12948 553 aa20.41■□□□□ 0.86
CDH11-218ENST00000569783 C10orf120Q5SQS8 335 aa20.41■□□□□ 0.86
CDH11-218ENST00000569783 KLHDC10Q6PID8 442 aa20.41■□□□□ 0.86
CDH11-218ENST00000569783 GPRIN1Q7Z2K8 1008 aa20.41■□□□□ 0.86
CDH11-218ENST00000569783 CEP76Q8TAP6 659 aa20.41■□□□□ 0.86
CDH11-218ENST00000569783 NIF3L1Q9GZT8 377 aa20.41■□□□□ 0.86
CDH11-218ENST00000569783 SLC32A1Q9H598 525 aa20.41■□□□□ 0.86
CDH11-218ENST00000569783 MMRN2Q9H8L6 949 aa20.41■□□□□ 0.86
CDH11-218ENST00000569783 TMEM74BQ9NUR3 256 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms