RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 PPP3CCP48454 512 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 PDE6CP51160 858 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 GALK1P51570 392 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 COPB1P53618 953 aaKnown RBP9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 SEC13P55735 322 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 YWHAGP61981 247 aaKnown RBP eCLIP9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 UBXN1Q04323 297 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 TCF15Q12870 199 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 USP4Q13107 963 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 DRAP1Q14919 205 aaPredicted RBP9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 ANO4Q32M45 955 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 EML3Q32P44 896 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 BTBD8Q5XKL5 378 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 LCLAT1Q6UWP7 414 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 Q6ZS52 159 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 TPGS1Q6ZTW0 290 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 SLC47A2Q86VL8 602 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 BBS7Q8IWZ6 715 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 SCUBE3Q8IX30 993 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 CPA6Q8N4T0 437 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 ZNF606Q8WXB4 792 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 FAXDC2Q96IV6 333 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 FAM83CQ9BQN1 747 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 PDCL3Q9H2J4 239 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 ECT2Q9H8V3 914 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 FBRSL1Q9HCM7 1045 aaKnown RBP9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 ZDHHC4Q9NPG8 344 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 OBP2AQ9NY56 170 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 IL37Q9NZH6 218 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 TJP2Q9UDY2 1190 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 SFMBT1Q9UHJ3 866 aa9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.48□□□□□ -0.89
GTF3C1-210ENST00000569394 SLC12A8A0AV02 714 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 YJEFN3A6XGL0 299 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 E7ENQ6 273 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 MAN2B1O00754 1011 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 TRDMT1O14717 391 aaKnown RBP9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 GABBR2O75899 941 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 ZBED1O96006 694 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 EGFP01133 1207 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 ZDHHC11BP0C7U3 371 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 GJA4P35212 333 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 SLC6A11P48066 632 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 ZNF132P52740 706 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 POLR2FP61218 127 aaKnown RBP9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 SLC7A9P82251 487 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 NHLH1Q02575 133 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 ARID5AQ03989 594 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 KDSRQ06136 332 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 MTAPQ13126 283 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 ZNF268Q14587 947 aaPredicted RBP9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 NCAPHQ15003 741 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 PDGFRLQ15198 375 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 ANGPT1Q15389 498 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 SYCP1Q15431 976 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 CNGA2Q16280 664 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 FKBP15Q5T1M5 1219 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 KLHDC7AQ5VTJ3 777 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 CDKAL1Q5VV42 579 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 CCDC186Q7Z3E2 898 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 PHLDB2Q86SQ0 1253 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 DHX40Q8IX18 779 aaKnown RBP9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 ANKRD20A12PQ8NF67 263 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 RNF139Q8WU17 664 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 OVCA2Q8WZ82 227 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 ZFRQ96KR1 1074 aaKnown RBP9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 CEP295NLQ96MC4 621 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 NAT10Q9H0A0 1025 aaKnown RBP9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 C8orf33Q9H7E9 229 aaPredicted RBP9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 COMMD8Q9NX08 183 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 PLK2Q9NYY3 685 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 ZMYM5Q9UJ78 669 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 DNMT3LQ9UJW3 386 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 KIAA1257Q9ULG3 409 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 MRPS17Q9Y2R5 130 aaKnown RBP9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 USP3Q9Y6I4 520 aa9.47□□□□□ -0.89
GTF3C1-210ENST00000569394 ZDBF2Q9HCK1 2354 aa9.46□□□□□ -0.89
GTF3C1-210ENST00000569394 SYNJ2BP-COX16A0A087WUM0 186 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 FAM92AA1XBS5 289 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 TRIM24O15164 1050 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 EPHB6O15197 1021 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 NCAM2O15394 837 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 MSI1O43347 362 aaKnown RBP9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 MED7O43513 233 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 TSPAN3O60637 253 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 GRAP2O75791 330 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 GFPT2O94808 682 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 OLFM2O95897 454 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 CYP17A1P05093 508 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 SETSIPP0DME0 302 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 CLCN1P35523 988 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 KRT9P35527 623 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 PLA2G4AP47712 749 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 ZNF165P49910 485 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 CSTF1Q05048 431 aaKnown RBP9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 PTK2Q05397 1052 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 NR1H3Q13133 447 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 DHCR24Q15392 516 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 KLHL40Q2TBA0 621 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms